Journal Article
A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H.
Record Number:
4365
Year:
2019
Journal:
Microbial Ecology
Pages:
299-311
Volume:
79
Abstract:
Light is completely absent in cave habitats, causing a shortage or lack of autochthonous photosynthesis. Thus, understanding the
mechanisms underlying the ability of organisms to adapt to the unique cave habitat is of great interest. We used high-throughput
sequencing of the 16S ribosomal RNA gene of intestinal microorganisms from 11 Sinocyclocheilus (Cypriniformes: Cyprinidae)
species, to explore the characteristics of intestinal microorganisms and the adaptive mechanisms of Sinocyclocheilus cavefish and
surface fish.We found that the α-diversity and richness of the intestinal microbiome were much higher in cavefish than in surface fish.
Principal coordinate analysis showed that cavefish and surface fish formed three clusters because of different dominant gut microorganisms
which are generated by different habitats. Based on PICRUSt-predicted functions, harmful substance degradation pathways
were much more common in cavefish intestinal microorganisms than in those from surface fish. The intestinal microbiota of surface
fish group 1 had a higher capacity for carbohydrate metabolism, whereas protein and amino acid metabolism and digestive pathways
were more abundant inmicroorganisms from the cavefish group and surface fish group 2. Combined analysis of the intestinal microbial
composition and functional predictions further revealed the structures and functions of intestinal microbial communities in
Sinocyclocheilus cave and surface species. Moreover, based on their habits and intestinal microbial composition and intestinal
microbial functional predictions, we inferred that the three fish groups were all omnivorous; however, surface fish group 1 preferred
feeding on plants, while surface fish group 2 and cavefish preferred meat. This study improves our understanding of mechanisms of
adaptation in cave habitats and may contribute to the protection of these habitats from water pollution.
Times Cited:
34
Relevent Species:
Pseudosinocyclocheilus jinxiensis (Zheng, Xiu and Yang 2013) Zhang and Zhao 2016Sinocyclocheilus tianlinensis Zhou, Zhang and He 2004Sinocyclocheilus tileihornes Mao, Lu and Li 2003Sinocyclocheilus xunlensis Lan, Zhao and Zhang, 2004Sinocyclocheilus aquihornes Li and Yang 2007Sinocyclocheilus broadihornes Li and Mao 2007Sinocyclocheilus multipunctatus (Pellegrin 1931)Sinocyclocheilus luopingensis Li and Tao 2002Sinocyclocheilus jiuxuensis Li and Lan 2003Sinocyclocheilus donglanensis Zhao, Watanabe and Zhang 2006Sinocyclocheilus yishanensis Li and Lan 1992Sinocyclocheilus guanyangensis Chen, Peng and Zhang 2016Sinocyclocheilus lingyunensis Li, Xiao, Zan, Luo and Li 2000Sinocyclocheilus hugeibarbus Li and Ran in Li, Ran and Cheng 2003Sinocyclocheilus longibarbatus Wang and Chen 1989Sinocyclocheilus flexuosdorsalis Zhu and Zhu 2012Sinocyclocheilus brevibarbatus Zhao, Lan and Zhang 2009Sinocyclocheilus brevis Lan and Chen in Chen and Lan 1992Sinocyclocheilus longifinus Li 1996Sinocyclocheilus maculatus Li 2000Sinocyclocheilus anatirostris Lin and Luo 1986Sinocyclocheilus hyalinus Chen and Yang 1993Sinocyclocheilus cyphotergous (Dai 1988) Kottelat and Brehier 1999Sinocyclocheilus microphthalmus Li 1989Sinocyclocheilus altishoulderus (Li and Lan, 1992) Wang and Chen 1998Sinocyclocheilus convexiforeheadus Li, Yang and Li in Yang, Li and Li 2017Sinocyclocheilus bicornutus Wang and Liao 1997Sinocyclocheilus rhinocerous Li and Tao 1994Sinocyclocheilus angularis Zheng and Wang 1990Sinocyclocheilus anshuiensis Gan, Wu, Wei and Yang 2013Sinocyclocheilus luolouensis Lan in Lan, Gan, Wu and Yang 2013Sinocyclocheilus anophthalmus Chen and Chu 1988Sinocyclocheilus furcodorsalis Chen, Yang and Lan 1997Sinocyclocheilus zhenfengensis Liu, Deng, Ma, Xiao and Zhou 2018
Related Records:
Yijing, Jie (1541)
[Report of a transparent fish in the Alu Limestone Cave, Yunnan, China. Possibly Sinocyclocheilus hyalinus]
Pellegrin, J. (1931)Les cyprinides cavernicoles d'Afrique
Lin, R. D. and Luo, Z. (1986)A bew blind barbid fish (Pisces, Cyprinidae) from subterranean water in Guangxi, China
Dai, D. Y. (1988)Un nouveau poisson cavernicole
Chen, Y. R., Chu, X. L., Luo, Z. and Wu, J. (1988)A new blind cyprinid fish from Yunnan, China with a reference to the evolution of its characters
Li, G.L. (1989)On a new fish of the genus Sinocyclocheilus from Guangxi, China
Wang, D. and Chen, Y.Y. (1989)Descriptions of three new species of Cyprinidae from Guizhou Province, China (Cypriniformes: Cyprinidae)
Zheng, J. Z. and Wang, J. (1990)Description of a new species of the genus Sinocyclocheilus from China (Cypriniformes: Cyprinidae)
Chen, J.X. and Lan, J.H. (1992)Description of a new genus and three new species of fishes from Guangxi, China (Cypriniformes: Cyprinidae, Cobitidae)
Li, W.X. and Lan, J. H. (1992)A new genus and three new species of Cyprinidae from Guangxi, China
Li, W.X. and Lan, J. H. (1992)A new genus and three new species of Cyprinidae from Guangxi, China
Chen, Y.R. and Yang, J.X. (1993)Species and origin of cave dwelling Sinocyclocheilus fishes
Chen, Y.R. and Yang, J.X. (1993)A synopsis of cavefishes from China
Chen, Y.R. and Yang, J.X. (1993)Species and origin of cave dwelling Sinocyclocheilus fishes
Chen, Y.R. and Yang, J.X. (1993)A synopsis of cavefishes from China
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Chen, Y.R. and Yang, J.X. (1993)Species and origin of cave dwelling Sinocyclocheilus fishes
Chen, Y.R. and Yang, J.X. (1993)A synopsis of cavefishes from China
Chen, Y.R. and Yang, J.X. (1993)Species and origin of cave dwelling Sinocyclocheilus fishes
Chen, Y.R. and Yang, J.X. (1993)A synopsis of cavefishes from China
Chen, Y.R. and Yang, J.X. (1993)Species and origin of cave dwelling Sinocyclocheilus fishes
Chen, Y.R. and Yang, J.X. (1993)A synopsis of cavefishes from China
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Chen, Y.R., Yang, J.X. and Zhu, Z.G. (1994)A new blind cave fish of the genus Sinocyclocheilus from Yunnan with comments on its characteristic adaptation
Wang, D, Huang, Y, Liao, J and Zheng, J (1995)Taxonomic revision of the genus Gibbibarbus Dai
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Li, W., Wu, D., Chen, A. and Tao, J. (1997)Histological study on the horn-like projection on the head of Sinocyclocheilus rhinocerous
Wang, D.H. and Liao, J.W. (1997)A new species of Sinocyclocheilus from Guizhou, China (Cypriniformes, Cyprinidae, Barbinae)
Chen, Y.R., Yang, J.X and Lan, J. H. (1997)One new species of blind cavefishfrom Guangxi with comments on its phylogentic status (Cypriniformes: Cyprinidae: Barbinae)
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Wang, D. and Chen, Y.Y. (1998)On the diagnosis of Sinocyclocheilus and the taxonomic position of its closely related genus Anchicyclocheilus (Cypriniformes: Cyprinidae: Barbinae)
Wang, D. and Chen, Y.Y. (1998)On the diagnosis of Sinocyclocheilus and the taxonomic position of its closely related genus Anchicyclocheilus (Cypriniformes: Cyprinidae: Barbinae)
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Wang, D. and Chen, Y.Y. (1998)On the diagnosis of Sinocyclocheilus and the taxonomic position of its closely related genus Anchicyclocheilus (Cypriniformes: Cyprinidae: Barbinae)
Wang, D. and Chen, Y.Y. (1998)On the diagnosis of Sinocyclocheilus and the taxonomic position of its closely related genus Anchicyclocheilus (Cypriniformes: Cyprinidae: Barbinae)
Wang, D. and Chen, Y.Y. (1998)On the diagnosis of Sinocyclocheilus and the taxonomic position of its closely related genus Anchicyclocheilus (Cypriniformes: Cyprinidae: Barbinae)
Wang, D. and Chen, Y.Y. (1998)On the diagnosis of Sinocyclocheilus and the taxonomic position of its closely related genus Anchicyclocheilus (Cypriniformes: Cyprinidae: Barbinae)
Wang, D. and Chen, Y.Y. (1998)On the diagnosis of Sinocyclocheilus and the taxonomic position of its closely related genus Anchicyclocheilus (Cypriniformes: Cyprinidae: Barbinae)
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Li, W.X. and Tao, J.N. (2002)Local dissection of body of the fishes Sinocyclocheilus rhinocerous
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Xiao, H, Zhang, R, Feng, J, Ou, Y., M, Li, W, Chen, S and Zan, R (2002)Nuclear DNA content and ploidy of seventeen species of fishes in Sinocyclocheilus
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Xiao, H, Zhang, R, Feng, J, Ou, Y., M, Li, W, Chen, S and Zan, R (2002)Nuclear DNA content and ploidy of seventeen species of fishes in Sinocyclocheilus
Xiao, H, Zhang, R, Feng, J, Ou, Y., M, Li, W, Chen, S and Zan, R (2002)Nuclear DNA content and ploidy of seventeen species of fishes in Sinocyclocheilus
Xiao, H, Zhang, R, Feng, J, Ou, Y., M, Li, W, Chen, S and Zan, R (2002)Nuclear DNA content and ploidy of seventeen species of fishes in Sinocyclocheilus
Xiao, H, Zhang, R, Feng, J, Ou, Y., M, Li, W, Chen, S and Zan, R (2002)Nuclear DNA content and ploidy of seventeen species of fishes in Sinocyclocheilus
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Romero, A., Zhao, Y.H. and Chen, X.Y. (2009)The hypogean fishes of China
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Romero, A., Zhao, Y.H. and Chen, X.Y. (2009)The hypogean fishes of China
Zhao, Y.H. and Zhang, C.G. (2009)Endemic fishes of Sinocyclocheilus (Cypriniformes: Cyprinidae) in China - Species diversity, cave adaptation, systematics and zoogeography
Zhao, Y.H. and Zhang, C.G. (2009)Endemic fishes of Sinocyclocheilus (Cypriniformes: Cyprinidae) in China - Species diversity, cave adaptation, systematics and zoogeography
Romero, A., Zhao, Y.H. and Chen, X.Y. (2009)The hypogean fishes of China
Zhao, Y.H. and Zhang, C.G. (2009)Endemic fishes of Sinocyclocheilus (Cypriniformes: Cyprinidae) in China - Species diversity, cave adaptation, systematics and zoogeography
Romero, A., Zhao, Y.H. and Chen, X.Y. (2009)The hypogean fishes of China
Zhao, Y.H. and Zhang, C.G. (2009)Endemic fishes of Sinocyclocheilus (Cypriniformes: Cyprinidae) in China - Species diversity, cave adaptation, systematics and zoogeography
Romero, A., Zhao, Y.H. and Chen, X.Y. (2009)The hypogean fishes of China
Zhao, Y.H. and Zhang, C.G. (2009)Endemic fishes of Sinocyclocheilus (Cypriniformes: Cyprinidae) in China - Species diversity, cave adaptation, systematics and zoogeography
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Romero, A., Zhao, Y.H. and Chen, X.Y. (2009)The hypogean fishes of China
Zhao, Y.H. and Zhang, C.G. (2009)Endemic fishes of Sinocyclocheilus (Cypriniformes: Cyprinidae) in China - Species diversity, cave adaptation, systematics and zoogeography
Zhao, Y.H. and Zhang, C.G. (2009)Endemic fishes of Sinocyclocheilus (Cypriniformes: Cyprinidae) in China - Species diversity, cave adaptation, systematics and zoogeography
Kunming Institute of Zoology and Chinese Academy of Sciences (2009)Scietists found juvenile fish of Sinocyclocheilus hyalinus in ancient Alu Cave of Yunan
Zhao, Y.H. and Zhang, C.G. (2009)Endemic fishes of Sinocyclocheilus (Cypriniformes: Cyprinidae) in China - Species diversity, cave adaptation, systematics and zoogeography
Romero, A., Zhao, Y.H. and Chen, X.Y. (2009)The hypogean fishes of China
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Pan, Y., Hou, Z. and Li, S. (2010)Description of a new Macrobrachium species (Crustacea: Decapoda: Caridea: Palaemonidae) from a cave in Guangxi, with a synopsis of the stygobiotic Decapoda in China.
Pan, Y., Hou, Z. and Li, S. (2010)Description of a new Macrobrachium species (Crustacea: Decapoda: Caridea: Palaemonidae) from a cave in Guangxi, with a synopsis of the stygobiotic Decapoda in China.
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Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
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Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
Zhao, Y.H., Gozlan, R.E. and Zhang, C.G. (2011)Out of sight out of mind: current knowledge of Chinese cave fishes
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Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Xing, Y.C., Zhang, C.G., Fan, E.Y. and Zhao, Y.H. (2016)Freshwater fishes of China: species richness, endemism, threatened species and conservation
Zhang, C.G. and Zhou, Y.H. (2016)Species diversity and distribution of inland fishes in China
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Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
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Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Zhang, C.G. and Zhou, Y.H. (2016)Species diversity and distribution of inland fishes in China
Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Xing, Y.C., Zhang, C.G., Fan, E.Y. and Zhao, Y.H. (2016)Freshwater fishes of China: species richness, endemism, threatened species and conservation
Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
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Chen, Y.Q., Peng, C.-L. and Zhang, E. (2016)Sinocyclocheilus guanyangensis, a new species of cavefish from the Li-Jiang basin of Guangxi, China (Teleostei : Cyprinidae)
Jiang, Y., Fu, J., Zhang, D. and Zhao, Y. (2016)Investigation on the lateral line systems of two cavefish : Sinocyclocheilus macrophthalmus and S. microphthalmus (Cypriniformes: Cyprinidae)
Xing, Y.C., Zhang, C.G., Fan, E.Y. and Zhao, Y.H. (2016)Freshwater fishes of China: species richness, endemism, threatened species and conservation
Zhang, C.G. and Zhou, Y.H. (2016)Species diversity and distribution of inland fishes in China
Zhang, C.G. and Zhou, Y.H. (2016)Species diversity and distribution of inland fishes in China
Hao, Z., Zhang, Q. and Qu, B. (2016)Complete mitochondrial genome of a cavefish, Sinocyclocheilus anophthalmus (Cypriniformes: Cyprinidae)
Zhang, C.G. and Zhou, Y.H. (2016)Species diversity and distribution of inland fishes in China
Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Xing, Y.C., Zhang, C.G., Fan, E.Y. and Zhao, Y.H. (2016)Freshwater fishes of China: species richness, endemism, threatened species and conservation
Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
He, S., Lu, J., Jiang, W., Yang, S., Yang, J. and Shi, Q. (2016)The complete mitochondrial genome sequence of a cavefish Sinocyclocheilus anshuiensis (Cypriniformes: Cyprinidae)
Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Zhang, C.G. and Zhou, Y.H. (2016)Species diversity and distribution of inland fishes in China
Yang,J., Chen,X., Bai,J., Fang,D., Qiu,Y., Jiang,W., Yuan,H., Bian,C., Lu,J., He,S., Pan,X., Zhang,Y., Wang,X., You,X., Wang,Y., Sun,Y., Mao,D., Liu,Y., Fan,G., Zhang,H., Chen,X., Zhang,X., Zheng,L., Wang,J., Cheng,L. (2016)The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Zhang, C.G. and Zhou, Y.H. (2016)Species diversity and distribution of inland fishes in China
Huang, J.Q., Gluesenkamp, A., Fenolio, D.B., Wu, Z.Q. and Zhao, Y.H. (2017)Neotype designation and redescription of Sinocyclocheilus cyphotergous (Dai) 1988, a rare and bizarre cavefish species distributed in China (Cypriniformes: Cyprinidae)
Yang, H., Li, C. and Li, W. (2017)A New Species Cave Blind Fish of the Sinocyclocheilus from Yunnan Province: Sinocyclocheilus convexiforeheadus
Peng, S, Lu, J, Yang, J and al., et (2017)The complete mitochondrial genome of horned Golden-line barbell, Sinocyclocheilus rhinocerous (Cypriniformes, Cyprinidae)
Herzog, H., Klein, B. and Ziegler, A. (2017)Form and function of the teleost lateral line revealed using three-dimensional imaging and computational fluid dynamics
Li, C.Q., Huang, H.T., Yang, S., He, H., Fu, Q.Y., Chen, S.Y. and Xiao, H. (2018)Complete mitochondrial genome and phylogenetic analysis of Sinocyclocheilus oxycephalus
(Cypriniformes: Cyprinidae)
Li, C.Q., Huang, H.T., Yang, S., He, H., Fu, Q.Y., Chen, S.Y. and Xiao, H. (2018)Complete mitochondrial genome and phylogenetic analysis of Sinocyclocheilus oxycephalus
(Cypriniformes: Cyprinidae)
Li, C.Q., Huang, H.T., Yang, S., He, H., Fu, Q.Y., Chen, S.Y. and Xiao, H. (2018)Complete mitochondrial genome and phylogenetic analysis of Sinocyclocheilus oxycephalus
(Cypriniformes: Cyprinidae)
Zhang, X.-Y., Huang, Z.-Q., Ning, T., Xiang, X.H. Li, C.-Q. Chen, S.-Y. and Xiao, H. (2018)Microscopic and submicroscopic gradient variation of olfactory systems among six Sinocyclocheilus species living in different environments
Zhang, X.-Y., Huang, Z.-Q., Ning, T., Xiang, X.H. Li, C.-Q. Chen, S.-Y. and Xiao, H. (2018)Microscopic and submicroscopic gradient variation of olfactory systems among six Sinocyclocheilus species living in different environments
Zhang, X.-Y., Huang, Z.-Q., Ning, T., Xiang, X.H. Li, C.-Q. Chen, S.-Y. and Xiao, H. (2018)Microscopic and submicroscopic gradient variation of olfactory systems among six Sinocyclocheilus species living in different environments
Niu, C., Luo, J., Yang, J. and Zhao, Y. (2018)Length–weight relationships of four cavefish species from China
Niu, C., Luo, J., Yang, J. and Zhao, Y. (2018)Length–weight relationships of four cavefish species from China
Niu, C., Luo, J., Yang, J. and Zhao, Y. (2018)Length–weight relationships of four cavefish species from China
Niu, C., Luo, J., Yang, J. and Zhao, Y. (2018)Length–weight relationships of four cavefish species from China
Li, C.Q., Huang, H.T., Yang, S., He, H., Fu, Q.Y., Chen, S.Y. and Xiao, H. (2018)Complete mitochondrial genome and phylogenetic analysis of Sinocyclocheilus oxycephalus
(Cypriniformes: Cyprinidae)
Meng, F., Zhao, Y.H., Titus, T., Zhang, C.G. and Postlethwait, J.H. (2018)Brain of the blind: transcriptomics of the golden-line cavefish brain
Zhang, R., and Wang, X. (2018)Characterization and phylogenetic analysis of the complete mitogenome of a rare cavefish, Sinocyclocheilus multipunctatus (Cypriniformes: Cyprinidae).
Liu, T., Deng, H.Q., Ma, L., Xiao, N. and Zhou, J. (2018)Sinocyclocheilus zhenfengensis, a new cyprinid species (Pisces: Teleostei) from Guizhou Province, southwest China
Li, C.Q., Huang, H.T., Yang, S., He, H., Fu, Q.Y., Chen, S.Y. and Xiao, H. (2018)Complete mitochondrial genome and phylogenetic analysis of Sinocyclocheilus oxycephalus
(Cypriniformes: Cyprinidae)
Li, C.Q., Huang, H.T., Yang, S., He, H., Fu, Q.Y., Chen, S.Y. and Xiao, H. (2018)Complete mitochondrial genome and phylogenetic analysis of Sinocyclocheilus oxycephalus
(Cypriniformes: Cyprinidae)
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Li, P. and Yang, J. (2019)Complete mitochondrial genome and phylogenetic analysis of Sinocyclocheilus microphthalmus (Cypriniformes: Cyprinidae)
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Xu, G. Li, J., Huang, T., Gu, W., Cui, L., Zhang, Y. and Wang, B. (2019)The complete mitochondrial genome of Sinocyclocheilus qujingensis (Cyprinoidea: Cyprinidae)
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Xu, G., Li, J., Huang, T., Gu, W., Cui, L., Zhang, Y. and Wang, B. (2019)The complete mitochondrial genome of Sinocyclocheilus huizeensis (Cypriniformes: Cyprinidae)
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Soares, D., Pluviose, M. and Zhao, Y. (2019)Ontogenetic development of the horn and hump of the Chinese cavefish Sinocyclocheilus furcodorsalis (Cypriniformes: Cyprinidae)
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Policarpo, M., Fumey, J., Lafargeas, P., Legendre, L., Naquin, D., Thermes, C., Møller, P.R., Bernatchez, L., García-Machado, E., Rétaux, S. and Casane, D. (2019)Molecular decay of light-processing genes in cavefishes: assessing the effects of time,
genome architecture and gene flow
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Policarpo, M., Fumey, J., Lafargeas, P., Legendre, L., Naquin, D., Thermes, C., Møller, P.R., Bernatchez, L., García-Machado, E., Rétaux, S. and Casane, D. (2019)Molecular decay of light-processing genes in cavefishes: assessing the effects of time,
genome architecture and gene flow
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Luo, F., Huang, J., Shi, G., Luo, T., Liu, J. and Wen, Y. (2019)Complete mitochondrial genome of Sinocyclocheilus yishanensis (Cypriniformes: Cyprinidae) and phylogenetic position.
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Huang, Z., Titus, T., Postlethwait, J.H. and Meng, F. (2019)Eye degeneration and loss of otx5b expression in the cavefish Sinocyclocheilus tileihornes
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Huang, Z., Titus, T., Postlethwait, J.H. and Meng, F. (2019)Eye degeneration and loss of otx5b expression in the cavefish Sinocyclocheilus tileihornes
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Chen, H., Li, C., Liu, T., Chen, S. and Xiao, H. (2019)A metagenomic study of intestinal microbial diversity in relation to feeding habits of surface and cave-dwelling Sinocyclocheilus species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Lunghi, E., Zhao, Y., Sun, X. and Zhao, Y. (2019)Morphometrics of eight Chinese cavefish species
Ma, Z., Herzog, H., Jiang, Y., Zhao, Y. and Zhang, D. (2020)Exquisite structure of the lateral line system in eyeless cavefish Sinocyclocheilus tianlinensis contrast to eyed Sinocyclocheilus macrophthalmus (Cypriniformes: Cyprinidae)
Li, C., Chen, H., Zhao, Y., Chen, S. and Xiao, H. (2020)Comparative transcriptomics reveals the molecular genetic basis of pigmentation loss in Sinocyclocheilus cavefishes
Li, C., Chen, H., Zhao, Y., Chen, S. and Xiao, H. (2020)Comparative transcriptomics reveals the molecular genetic basis of pigmentation loss in Sinocyclocheilus cavefishes
Li, C., Chen, H., Zhao, Y., Chen, S. and Xiao, H. (2020)Comparative transcriptomics reveals the molecular genetic basis of pigmentation loss in Sinocyclocheilus cavefishes
Li, C., Chen, H., Zhao, Y., Chen, S. and Xiao, H. (2020)Comparative transcriptomics reveals the molecular genetic basis of pigmentation loss in Sinocyclocheilus cavefishes
Lunghi, E. and Zhao, Y. (2020)Do Chinese cavefish show intraspecific variability in morphological traits?
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Lunghi, E. and Zhao, Y. (2020)Do Chinese cavefish show intraspecific variability in morphological traits?
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Mao, T.-R., Liu, Y.-W., Meegaskumbura, M., Yang, J., Ellepola, G., Senevirathne, G., Fu, C.-H., Gross, J.B. and Pie, M.R. (2020)Evolution in Sinocyclocheilus cavefish is marked by rate shifts, reversals and origin of novel traits
Policarpo, M., Fumey, J., Lafargeas, P., Naquin, D., Thermes, C., Naville, M., Dechaud, C., Volff, J.-M., Cabau, C., Klopp, C., Rask Møller, P., Bernatchez, L., García-Machado, E., Rétaux, S. and Casane, D. (2020)Contrasted gene decay in subterranean vertebrates: insights from cavefishes and fossorial mammals
Policarpo, M., Fumey, J., Lafargeas, P., Naquin, D., Thermes, C., Naville, M., Dechaud, C., Volff, J.-M., Cabau, C., Klopp, C., Rask Møller, P., Bernatchez, L., García-Machado, E., Rétaux, S. and Casane, D. (2020)Contrasted gene decay in subterranean vertebrates: insights from cavefishes and fossorial mammals
Policarpo, M., Fumey, J., Lafargeas, P., Naquin, D., Thermes, C., Naville, M., Dechaud, C., Volff, J.-M., Cabau, C., Klopp, C., Rask Møller, P., Bernatchez, L., García-Machado, E., Rétaux, S. and Casane, D. (2020)Contrasted gene decay in subterranean vertebrates: insights from cavefishes and fossorial mammals
Policarpo, M., Fumey, J., Lafargeas, P., Naquin, D., Thermes, C., Naville, M., Dechaud, C., Volff, J.-M., Cabau, C., Klopp, C., Rask Møller, P., Bernatchez, L., García-Machado, E., Rétaux, S. and Casane, D. (2020)Contrasted gene decay in subterranean vertebrates: insights from cavefishes and fossorial mammals
Zhao, Y., Zhang, C. and Proudlove, G.S. (2021)Fishes of the Genus Sinocyclocheilus (Cypriniformes: Cyprinidae) in China. Systematics, biology, biogeography and cave adaptation
Li, R., Wang, X., Bian, C., Gao, Z., Zhang, Y., Jiang, W., Wang, M., You, X., Cheng, L., Pan, X., Yang, J. and Shi, Q. (2021)Whole-genome sequencing of Sinocyclocheilus maitianheensis reveals phylogenetic evolution and immunological variances in various Sinocyclocheilus fishes
Zhao, Y., Zhang, C. and Proudlove, G.S. (2021)Fishes of the Genus Sinocyclocheilus (Cypriniformes: Cyprinidae) in China. Systematics, biology, biogeography and cave adaptation
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