Subterranean Fishes of the World

Journal Article

A supernumerary ‘‘B-sex’’ chromosome drives male sex determination in the Pachon cavefish, Astyanax mexicanus

Imarazene, B., Du, K., Beille, S., Jouanno, E., Feron, R., Pan, Q., Torres-Paz J., Lopez-Roques, C., Castinel,A., Gil, L., Kuchly, C., Donnadieu, C., Parrinello,H., Journot, L., Cabau, C., Zahm, M., Klopp, C., Pavlica, T., Al-Rikabi, A., Liehr, T., Sima

Record Number:

5491

Year:

2021

Journal:

Current Biology

Pages:

4800-4809

Volume:

PMCID:

https://doi.org/10.1016/j.cub.2021.08.030

Abstract:

Sex chromosomes are generally derived from a pair of classical type-A chromosomes, and relatively few alternative models have been proposed up to now.1,2 B chromosomes (Bs) are supernumerary and dispensable chromosomes with non-Mendelian inheritance found in many plant and animal species3,4 that have often been considered as selfish genetic elements that behave as genome parasites.5,6 The observation that in some species Bs can be either restricted or predominant in one sex7–14 raised the interesting hypothesis that Bs could play a role in sex determination.15 The characterization of putative B master sex-determining (MSD) genes, however, has not yet been provided to support this hypothesis. Here, in Astyanax mexicanus cavefish originating from Pacho´ n cave, we show that Bs are strongly male predominant. Based on a high-quality genome assembly of a B-carrying male, we characterized the Pacho´ n cavefish B sequence and found that it contains two duplicated loci of the putative MSD gene growth differentiation factor 6b (gdf6b). Supporting its role as an MSD gene, we found that the Pacho´ n cavefish gdf6b gene is expressed specifically in differentiating male gonads, and that its knockout induces male-to-female sex reversal in B-carrying males. This demonstrates that gdf6b is necessary for triggering male sex determination in Pacho´ n cavefish. Altogether these results bring multiple and independent lines of evidence supporting the conclusion that the Pacho´ n cavefish B is a ‘‘B-sex’’ chromosome that contains duplicated copies of the gdf6b gene, which can promote male sex determination in this species.

Times Cited:

Relevent Species:

Astyanax jordani (Hubbs and Innes 1936) Buckup 2003

Related Records:

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Wilkens, H. (1970)

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Wiley, S. and Mitchell, R.W. (1971)

A bibliography of the Mexican eyeless characib fishes of the genus Astyanax

Wilkens, H. (1971)

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Reddell, J.R. and Mitchell, R.W. (1971)

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Zur phylogenetischen Ruckbildung des Auges Cavernicler. Untersuchungen an Anoptichthys jordani (= Astyanax mexicanus), Characidae, Pisces

Zaccone, G. (1972)

Comparative histochemical investigations on the mucous cells of the branchial epithelium of Mugil cephalus and Anoptichthys jordani

Elliott, W.R. (1972)

Trip report: July - August 1969

Thines, G. and Wissocq, N. (1972)

Etude comparee du comportement alimentaire de deux poissons cavenicoles (Anoptichthys jordani Hubbs et Innes et Ceacobarbus geertsii Blgr)

Wilkens, H. and Burns, R. J. (1972)

A new Anoptichthys cave population (Characidae, Pisces)

Avise, J.C. and Selander, R.K. (1972)

Evolutionary genetics of cave-dwelling fishes of the genus Astyanax

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Wilkens, H. (1972)

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Wilkens, H. (1972)

Uber Praadaptionen fur das Holhlenleben, untersucht am Laichverhalten ober- und unterirdischer Populationen des Astyanax mexicanus (Pisces)

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Hormonal induction of ovulation and spawning in the blind cave fish, Anoptichthys jordani with the use of human chorionic gonadotropin

Zeitlin, S. M. and McDevitt, D. S. (1973)

Flourescent antibody study of the developing lens of the blind cave fish

Mitchell, R.W. and Elliott, W.R. (1973)

The cave habitats of the Mexican eyeless characin fishes

Mitchell, R.W. (1973)

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Reddell, J.R. and Elliott, W.R. (1973)

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Reddell, J.R. and Elliott, W.R. (1973)

A checklist of the cave fauna of Mexico. V Additional records from the Sierra de Guatemala, Tamaulipas

Mitchell, R.W. and Elliott, W.R. (1973)

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Phylogenetic age and degree of reduction in cave animals

Wilkens, H. (1973)

Anciennete phylogenetique et degres de reduction chez les animaux cavernicoles

Yasuda, K. (1973)

Comparative studies on the swimming behaviour of the blind cave fish and the goldfish

Durand, J.P. (1973)

Aspects ultrastructuraux des mechanismes de la rudimentation retinienne chez l'Anoptichthys adulte forme cavernicole aveugle de l'Astyanax mexicanus (Caracidae, Pisces)

Egar, M.W. (1974)

An ultrastructural study of the optic nerve of the blind cave fish

Fish, J. (1974)

La Sistema de Los Sabinos. Mexico's longest cave

Chakraborty, R. and Nei, M. (1974)

Dynamics of gene differentiation between incompletely isolated populations of unequal size

Schemmel, C. (1974)

Ist die cavernicole Micos-population von Astyanax mexicanus (Characidae, Pisces) hybriden ursprungs ?

Schemmel, C. (1974)

Genetische Untersuchungen zur Evolution des Geschmacksapparates bei cavernicolen Fischen

Pfeiffer, W. (1974)

Pheromones in fish and amphibia

Sligar, C. (1974)

An investigation of tectal efferents in the blind cave fish, A. hubbsi

Omura, Y. (1975)

Influence of light and darkness on the ultrastructure of the pineal organ in the blind cave fish, Astyanax mexicanus

Sadoglu, P. (1975)

Genetic paths leading to blindness in Astyanax mexicanus

Peters, N., Scholl, A. and Wilkens, H. (1975)

Der Micos-Fisch, Hohlenfisch in statu nascendi oder Bastard ?Ein Beitrag zur Evolution der Hohlentiere

Pfeiffer, W. (1975)

Uber fluoreszierende Pterine aus der Haut von Cypriniformes (Pisces) und ihre Beziehung zum schreckstoff

Wilkens, H. (1976)

Genetic and phenotypic variability in cave animals. Studies on phylogenetically young cave populations of Astyanax mexicanus (Filippi) (Characidae, Pisces)

Erckens, W. and Weber, F. (1976)

Rudiments of an ability for time measurement in the cavernicolous fish Anoptichthys jordani Hubbs and Innes (Pisces, Characidae)

Voneida, T. J. and Sligar, C. (1976)

A comparative neuroanatomic study of retinal projections in two fishes: Astyanax hubbsi (the blind cave fish) and Astyanax mexicanus

Durand, J.P. (1976)

Sur la structure oculaire, l'ultrastructure des muscles extrinseques, des envelopes de l'oeil et de l'epithelium pigmentaire retinien de l'Anoptichthys (forme aveugle de l'Astyanax mexicanus, Characidae, Pisces)

Herwig, H. J. (1976)

Ultrastructural investigations on the pineal organ of a cave fish, Anoptichthys jordani and its ancestor, Astyanax mexicanus

Herwig, H. J. (1976)

Comparative ultrastructural investigations on the pineal organ of the blind cave fish, Anoptichthys jordani and its ancestor, the eyed rive fish, Astyanax mexicanus

Wilkens, H (1976)

Genotypic and phenotypic variability in cave animals. Studies on a phylogenetically young cave population of Astyanax mexicanus (Filippi) (Characidae, Pisces)

Sligar, C. and Voneida, T.J. (1976)

Tectal efferents in the blind cave fish Asyanax hubbsi

Durand, J.P. (1976)

Rudimentation des yeux chez les poissons et urodeles souterraines

Mitchell, R.W. and Russell, W.H. (1977)

The subsurface waters of the Sierra de El Abra of Mexico

Fish, J. (1977)

Karst hydrogeology and geomorphology of the Sierra de El Abra and the Valles-San Luis Potosi region, Mexico

Zaccone, G. (1977)

Histology, innervation, and histochemistry of the UB [Ultimobranchial] gland in the Mexican cave fish Anoptichthys jordani Hubbs et Innes (Teleostei, Characidae)

Wilkens, H. (1977)

Die Rudimenation des Rumpfkanals bei kavernicolen Populationen des Astyanax (Characidae, Pisces)

Edwards, R.J. (1977)

Seasonal migrations of Astyanax mexicanus as an adaptation to novel environments

Mitchell, R.W., Russell, W.H. and Elliott, W.R. (1977)

Mexican eyeless characin fishes, genus Astyanax: Environment,distribution and evolution

Kirby, R.F., Thompson, K.W. and Hubbs, C. (1977)

Karyotypic similarities between the Mexican and blind tetras

Mitchell, R.W. and Elliott, W.R. (1977)

The habitats of the eyeless characin fishes of the genus Astyanax

Mitchell, R.W. (1977)

Introgression between the Mexican eyeless characin fishes and their epigean ancestor, Astyanax mexicanus

Mitchell, R.W. and Cooke, J.W. (1977)

Preliminary morphometric comparisons of several populations of Mexican eyeless characin fishes of the genus Astyanax

Mitchell, R.W. and Russell, W.H. (1977)

Stream capture in the Huastecan Province of Mexico

Cooper, J.E. (1977)

[Review of] Mexican eyeless characin fishes of genus Astyanax: Environment, distribution and evolution (Mitchell,R.W., Russell, W.H. and Elliott, W.R.)

Pfeiffer, W. (1977)

The distribution of fight reaction and alarn substance cells in fishes

Yew, D. T. and Yoshihara, H. M. (1977)

An ultrastructural study of the retina of the blind cave fish Astyanax hubbusi (sic)

Thines, G. and Weyers, M. (1978)

Responses locomotrices du poisson cavernicole Astyanax jordani (Pisces, Characidae) a des signaux periodiques et aperiodiques de lumiere et de temperature

Birkhead, W.S. (1978)

Astyanax mexicanus (Filippi) Mexican Tetra

Durand, J.P. (1978)

Phenomenes de convergences tissulaires et cytologiques, lies aux processus degeneratifs qui affectent l'oeil chez deux teleoteens cavericoles Asytyanax (Anoptichthys) mexicanus (Characidae) et Lucifuga (Stygicola) dentatus (Ophidiidae)

Weissert, R. (1979)

Dressurexperimente und Verhaltensbeobachtungen zum Formunterscheidingsvermogen der blinden Hohlenfisches Anoptichthys jordani Hubbs et Innes

Durand, J.P. (1979)

Aspects ultrastructuraux des mechanismes de la rudimentation retinienne chez l'Anoptichthys adult, forme cavernicole aveugle de l'Astyanax mexicanus (Characidae, Pisces)

Pactl, J. (1979)

Neue Beitrage zur Kenntnis der Apterygoten-Sammlung des Zoologischen Instituts und Zoologischen Museums der Universitat Hamburg. 6. Weitere Doppel - und Borstenschwanze (Diplura: Campodeidae; Thysanura: Lepismatidae und Nicoletiidae)

Sadoglu, P. (1979)

A breeding method for blind Astyanax mexicanus based on annual spawning patterns

Fish, S.E. and Voneida, T.J. (1979)

Extravisual neurons in the optic tectum of a sighted and unsighted fish. 5:784

Wilkens, H., Peters, H. and Schemmel, C. (1979)

Gesetzmassigkeiten der regressiven Evolution

Woodhead, A. D. and Achey, P. M. (1979)

Photoreactivating enzyme in the blind cave fish, Anoptichthys jordani

Wilkens, H. (1980)

Prinzipien der Manifestation polygener Systeme

Wilkens, H. (1980)

Zur Problematik der Rudimentation, untersucht an der Ontogenie des Auges von Hohlenfischen (Astyanax mexicanus)

Schemmel, C. (1980)

Studies on the genetics of feeding behaviour in the cave fish Astyanax mexicanus f. Anoptichthys. An example of apparent monofactorial inheritance by polygenes

Weissert, R. (1980)

Formunterscheidung durch einer blinden Hohlenfisch (Anoptichthys jordani, Hubbs et Innes)

Quinn, T. P. (1980)

Locomotor responses of juvenile blind cavefish, Astyanax jordani, to the odors of conspecifics

Campenhausen, C., Riess, I. and Weissert, R. (1981)

Detection of stationary objects by blind cave fish Anoptichthys jordani (Characidae)

Erckens, W. (1981)

Analyse von versuchen zur Erforschung der Grundlagen der tagesperiodishen Aktivistatsvertelung einer ober- und einer unterirdischen Populationen des Astyanax mexicanus (Characidae, Pisces)

Erckens, W. (1981)

The activity controlling time-system in epigean and hypogean populations of Astynax mexicanus (Charicidae, Pisces)

Dolle, A. (1981)

Uber Ablauf und Function des Aggressionsverhaltens von Astyanax mexicanus (Charicidae, Pisces) unter Berucksichtigung zweir Hohlenpopulationen

Weissert, R. and Campenhausen, C. (1981)

Discrimination between stationary objects by the blind cave fish Anoptichthys jordani (Characidae)

Wilkens, H. (1981)

Regressive evolution and phylogenetic age

Herwig, H. J. (1981)

The pineal organ. An ultrastructural and biochemical study on the pineal organ of Hemigrammus caudovittatus and other closely related characid fish with special reference to the Mexican blind cave fish Astyanax mexicanus

Reddell, J. R. (1981)

A review of the cavernicole fauna of Mexico, Guatemala and Belize

Erckens, W. and Martin, W. (1982)

Exogenous and endogenous control of swimming activity in Astyanax mexicanus (Characidae, Pisces) by direct light response and by circadian oscillator. I Analyses of the time control system of an epigean river population

Tabata, M. (1982)

Persistence of pineal photosensory function in blind cave fish, Astyanax mexicanus

Jankowska, M. and Thines, G. (1982)

Etude comparative de la densite de groupes de poissons cavernicoles et epigee (Characidae, Cyprinidae, Clariidae)

Erckens, W. and Martin, W. (1982)

Exogenous and endogenous control of swimming activity in Astyanax mexicanus (Characidae, Pisces) by direct light response and by a circadian oscillator. II Features of time controled behaviour of a cave population and their comparison to an ancestral epig

Rose, FL. and Mitchell, R.W. (1982)

Comparative lipid values of epigean and cave adapted Astyanax

Lamprecht, G. and Weber, F. (1982)

A test for the biological significance of circadian clocks: Evolutionary regression of the time measuring ability in cavernicolous animals

Romero, A. (1982)

Troglophilic behaviour in a population of Astyanax fasciatus (Characidae): A route to cave colonisation ?

Romero, A. (1983)

Introgressive hybridisation in the Astyanax fasciatus (Pisces, Characidae) population at La Cueva Chica

Zilles, K., Tillmann, B. and Bennemann, R. (1983)

The development of the eye in Astyanax mexicanus (Characidae,Pisces), its blind cave derivative, Anoptichthys jordani (Characidae, Pisces, and their crossbreeds. A scanning and transmission electron microscopic study

Parzefall, J. (1983)

Field observations in epigean and cave populations of the Mexican characid Astyanax mexcanus (Pisces, Characidae)

Voneida, T.J., Fish, S.E. and Cauller, T.C. (1983)

Central projections of trigeminal and lateral line nerves in the blind cave fish, Astyanax hubbsi

Senkel, S. (1983)

Zum Schwarmverhalten von Bastarden zwischen Fluss- und Hohlenpopulationen bei Astyanax mexicanus (Pisces, Characidae)

Parzefall, J. (1983)

Zur verebung von Verhaltensweisen bei Hohlentieren und ihren oberirdischen Verwandten

Parzefall, J. (1983)

Field observations in epigean and cave populations of the Mexican characid Astyanax mexcanus (Pisces, Characidae)

Romero, A. (1984)

Responses to light in cave and surface populations of Astyanax fasciatus (Pisces, Characidae): An evolutionary interpretation

Romero, A. (1984)

Behaviour in an 'intermediate' population of the subterranean dwelling characid Astyanax fasciatus

Wilkens, H. (1984)

Zur Evolution von Polygensystemen, untersucht an ober- unt unterirdischen Populationen des Astyanax mexicanus (Characidae, Pisces)

Schuppa, M. (1984)

Morphometrische und meristische Untersuchungen an verschiedenen Astyanax-populationen (Characidae) Mexicos

Voneida, T. J. and Fish, S. E. (1984)

Central nervous system changes related to the reduction of visual inputs in a naturally blind fish (Astyanax hubbsi)

Romero, A. (1984)

Cave colonisation by fish: The role of bat predation

Romero, A. (1984)

Charles Marcus Breder, Jr. 1897-1983

Fruhbeis, B. (1984)

Verhaltensphysiologische Untersuchungen zur Frequenz- unterscheidung und Empfindlichkeit durch das Seitenlinienorgan des blinden Hohlenfisches Anoptichthys jordani (Hubbs et Innes)

Mothes, P. and Jameson, R. (1984)

Sotano de Vasquez

Mangold-Wernado, U. and Pfeiffer, W. (1984)

Zur morphologie des Geruchsorgans von Characoidea (Ostariophysi, Pisces)

Teyke, T. (1985)

Collision with and avoidance of obstacles by blind cave fish Anoptichthys jordani (Characidae)

Hassan, E.S. (1985)

Mathematical analysis of the stimulus for the lateral-line argan

Romero, A. (1985)

Ontogenetic change in phototactic responses of surface and cave populations of Astyanax fasciatus (Pisces, Characidae)

Hassan, E.S. (1985)

Mathematical analysis of the stimulus for the lateral line organ

Wilkens, H. (1985)

The evolution of polygenic systems, studies on epigean and cave poplations of Astyanax fasciatus (Characidae, Pisces)

Lamprecht, G. and Weber, F. (1985)

Time-keeping mechanisms and their ecological significance in cavernicolous animals

Burchards, H., Dolle, A. and Parzefall, J. (1985)

The aggressive behaviour of an epigean population of Astyanax mexicanus (Characidae, Pisces) and some observations of three subterranean populations

Fricke, D. (1985)

Die Alarmreaktion bei Hohlen- und Flussfisch- populationen von Astyanax mexicanus (Pisces, Characidae)

Romero, A. (1985)

Morphological variation accompanying cave evolution in Astyanax fasciatus (Pisces: Characidae)

Wilkens, H. (1985)

Non-allopatric speciation in cave fishes: Studies in epigean and hypogean Astyanax populations (Characidae, Pisces)

Burchards, H. and Parzefall, J. (1985)

Das Aggressionsverhaltens oberirdischer und unterirdischer hohlenledenden Populationen von Astyanax mexicanus (Pisces, Characidae) und ihrer Bastarde

Voneida, TJ and Fish, SE (1985)

An ultrastructural study of retinotectal connections and normal tectical synaptic organisation in the blind cave fish Astyanax hubbsi

Huppop, K. (1985)

The role of metabolism in the evolution of cave animals

Romero, A. (1985)

Cave colonisation by fish: role of bat predation

Hassan, E.S. (1986)

On the discrimination of spatial intervals by the blind cave fish Anoptichthys jordani

Romero, A. (1986)

Charles Breder and the Mexican blind cave Characid

Wilkens, H. (1986)

The evolution of polygenic systems. Studies on epigean and cave populations of Astyanax fasciatus (Characidae, Pisces)

Parzefall, J. and Senkel, S. (1986)

Das schwarmverhalten bei oberirdisch und in hohlen lebenden populationen von Peocilia mexicana und Astyanax mexicanus (Peociliidae, Characidae, Pisces)

Parzefall, J. and Senkel, S. (1986)

Schooling behaviour in cavernicolous fish and their epigean conspecifics

Parzefall, J. (1986)

Behavioural ecology of cave-dwelling fishes

Wilkens, H. and Huppop, K. (1986)

Sympatric speciation in cave fishes ? Studies on a mixed population of epi- and hypogean Astyanax (Characidae, Pisces)

Parzefall, J. (1986)

On the heredity of behavior patterns in cave animals and their epigean relatives

Hassan, E.S. (1986)

On the discrimination of spatial intervals by the blind cave fish Anoptichthys jordani

Huppop, K. (1986)

Comparative early life history in surface and cave fish

De Fraipont, M. (1986)

La detection chimique de l'odeur des congeneres chex Astyanax mexicanus (forme cavernicole). Responses observees pour des cencentrations egales etablies a partir de groupes de densites differentes

Fraipont, M. (1986)

La detection chimique chez Astyanax mexicanus (forme cavernicole) en fonction de la densite des groupes

De Fraipont, M. and Thines, G. (1986)

Responses of the cave fish Astyanax mexicanus (Anoptichthys antrobius) to the odor of know or unknown conspecifics

Huppop, K. (1986)

Oxygen consumption of Astyanax fasciatus (Characidae, Pisces): a comparison of epigean and hypogean populations

De Fraipont, M. and Thines, G. (1986)

La detection chimique de l'odeur des predaeurs chex Astyanax mexixanus (formes cavernicoles et epigees)

Wilkens, H. (1987)

Genetic analysis of evolutionary processes

Fricke, D. (1987)

Reaction to alarm substance in cave populations of Astyanax mexicanus (Characidae, Pisces)

De Fraipont, M. (1987)

La detection chimique chez Astyanax mexicanus (forme cavernicole, Pisces, Characidae), en fonction du sexe

De Fraipont, M. (1987)

La detection chimique chez Astyanax mexicanus (Teleostei, Characidae) (forme cavernicole) en fonction de la densite des groupes

Huppop, K. (1987)

Food finding ability in cave fish (Astyanax fasciatus)

Teyke, T. (1988)

Flow field, swimming velocity and boundary layers: parameters which affect the stimulus for the lateral line organ in blind fish

Wilkens, H. (1988)

Evolution and genetics of epigean and cave Astyanax fasciatus (Characidae, Pisces): support for the neutral mutation theory

Fricke, D. (1988)

Alarmreaktion und Schwarmverhalten bei ober- und unterirdisch lebenden Populationen der Art Astyanax fasciatus (Cuvier, 1819) und ihrer Bastarde (Characidae, Pisces)

Coombs, S., Janssen, J. and Webb, J. (1988)

Diversity of lateral line systems: evolutionary and functional considerations

De Fraipont, M. (1988)

The responses of Astyanax mexicanus (Pisces, Characidae, epigean form) to chemical traces of conspecific groups of varying densities

Huppop, K. (1988)

Phanomene und Bedeutung der Energieersparnis bei dem Hohlenfisch Astynax fasciatus

Morris, N (1989)

Sierra De El Abra cave map portfolio

Teyke, T. (1989)

Learning and remembering the environment in the blind cave fish Anoptichthys jordani

Fack, H. and Wilkens, H. (1989)

Eye reduction in hybrids and a naturally viable cave form Astyanax fasciatus (Characidae, Pisces)

Langecker, T. G. (1989)

Studies of the light reaction of epigean and cave populations of Astyanax fasciatus (Characidea, Pisces)

Fricke, D. and Parzefall, J. (1989)

Alarm reaction, aggresion and scholing in cave and river populations of Astyanax fasciatus (Pisces, Characidae) and their hybrids

Huppop, K. (1989)

Food-finding ability in cave fish (Astyanax fasciatus). (Abstract)

Wilkens, H. (1989)

Genetic analysis of evolutionary processes. (Abstract)

Hassan, E.S. (1989)

Hydrodynamic imaging of the surroundings by the lateral line of the blind cave fish Anoptichthys jordani

Huppop, K. (1989)

Genetic analysis of oxygen consumption in cave and surface fish of Astyanax fasciatus (Characidea, Pisces): Further support for the neutral mutation theory

Teyke, T. (1990)

Morphological differences in neuromasts of the blind cave fish Asyanax hubbsi and the sighted river fish Astyanax mexicanus

Klimpel, B. and Parzefall, J. (1990)

Comparative studies of predatory behaviour in cave and river populations of Astyanax fasciatus (Characidae, Pisces)

Langecker, T. G. (1990)

Das Licht als Evolutionsfaktor bei Hohlentieren- untersucht an ober- und unterirdisch lebenden Populationen des Astyanax fasciatus (Characidae, Pisces)

Parzefall, J. and Fricke, D. (1990)

Alarm raection and schooling in population hybrids of Astyanax (Pisces, Characidae)

Abdel-Latif, H., Hassan, E.S. and von Campenhausen, C. (1990)

Sensory performance of blind Mexican cave fish after destruction of the canal neuromasts

Peters, N., Schmidt, W. and Fricke, D. (1990)

Die Feinstruktur der Kolbenzellen (Schreckstoffzellen) in der Epidermis von Astyanax mexicanus Fillippi 1853 (Characidae, Pisces) und seinen Hohlen derivaten "Anoptichthys"

Langecker, T. G. (1990)

The significance of light reactions in blind fish

Langecker, T. G. (1990)

Der Einfluss der Lichtes bei der Evolution von Hohlenfischen

Yokoyama, R. and Yokoyama, S. (1990)

Convergent evolution of the red- and green-like visual pigment genes in fish Astyanax fasciatus and human

Yokoyama, R and Yokoyama, S (1990)

Isolation, DNA sequence and evolution of a color visual pigment gene of the blind cavefish Astyanax fasciatus

Huppop, K. (1991)

Muskulatur als Fettspeicher beim mexikanischen Hohlensalmler Astyanax fasciatus

Riedel, G. and Krug, L. (1991)

Olfaktorische Regionen im Vorderhirn des blinden Hohlenfisches Asyanax hubbsi

Bensouilah, M. and Denizot, J.P. (1991)

Taste buds and neuromasts of Astyanax jordani: Distribution and immunochemical demonstration of co-localised Substance P and Enkephalins

Campenhausen, C. (1991)

Die Bedentung der "inneren Landkarte" fur die Orientierung - Untersuchungen an blinden Hohlenfischen

Parzefall, J. and Fricke, D. (1991)

Alarm and schooling in population hybrids of Astyanax fasciatus

Langecker, T. G., Wilkens, H. and Junge, P. (1991)

Introgresve hybridisation in the Pachon cave population of Astyanax fasciatus (Teleostei, Characidae)

Wilkens, H., Junge, P. and Langecker, T. G. (1991)

Speciation of troglobites: Studies on the San Antonio Cave (Oaxaca, Mexico)

Huppop, K. and Wilkens, H. (1991)

Bigger eggs in subterranean Astyanax fasciatus (Characidae, Pisces)

Zafar, N.P. and Morgan, E. (1992)

Feeding entrains an endogenous rhythm of swimming activity in the blind Mexican cavefish

Wilkens, H. (1992)

Neutral mutations and evolutionary progress

Lamprecht, G. and Weber, F. (1992)

Spontaneous locomotion behaviour in cavernicolous animals: The regression of the endogenous circadian system

Parzefall, J. (1992)

Schooloing behaviour in population hybrids of Astyanax fasciatus and Poecilia mexicana (Pisces, Characidae and Poeciliidae)

Parzefall, J. (1992)

Behavioural aspects in animals living in caves

Fish, S.E. and Ghosh, P. (1992)

Occulomotor system of a blind cave fish

Langecker, T.G. and Longley, G. (1992)

Blind catfish (Trogloglanis pattersoni and Satan eurystomus) from deep artesian waters. A study on convergent adaptations to cave and deep sea biota

Wilkens, H. and Meyer, M. (1992)

Eye formation and regression during early ontogeny in cave fishes

Hassan, E. S., Abdel-Latif, H. and Biebricher, R. (1992)

Studies on the effects of ca++ and co++ on the swimmimg behaviour of the blind Mexican cavefish

Coombs S., Janssen J. and Montgomery J. (1992)

Functional and Evolutionary Implications of Peripheral Diversity in Lateral Line Systems

Langecker, T. G. (1992)

Light sensitivity of cave vertebrates. Behavioural and morphological aspects

De Fraipont, M. (1992)

Response d'Astyanax mexicanus aux stimulations chimiques provenant de groupes de congeneres a differents stades de developpement

Langecker, T. G. (1992)

Persistence of ultrastructurally well devoloped photoreceptor cells in the pineal organ of a phylogenetically old cave dwelling population of Astyanax fasciatus Cuvier, 1819 (Teleostei, Characidae)

Yokoyama, R. and Yokoyama, S. (1993)

Molecular characterization of a blue visual pigment gene in the fish Astyanax-Fasciatus

Parzefall, J. (1993)

Behavioural ecology of cave-dwelling fishes

Langecker, T. G. (1993)

Genetic analysis of the dorsal light reaction in epigean and cave-dwelling Astyanax fasciatus (Teleostei, Characidae)

Langecker, T. G., Schmale, H. and Wilkens, H. (1993)

Transcription of the opsin gene in degenerate eyes of cave dwelling Astyanax fasciatus (Teleostei, Characidae) and of its conspecific epigean ancestor during early ontogeny

Langecker, T. G., Schmale, H. and Wilkens, H. (1993)

Strukturelle und molekulargenetische Untersuchungen zur Augenreduktion beim Hohlenfisch Astyanax fasciatus (Teleostei, Characidae)

Peters, N., Schacht, V., Schmidt, W. and Wilkens, H. (1993)

Gehirnproportionen und Auspragungsgrad der Sinnesorgane von Astyanax mexicanus (Pisces: Characidae). Ein Vergleich zwischen dem Flussfisch ubd seinen Hohlen-derivaten 'Anoptichthus'

Parzefall, J. (1993)

Schooling behaviour in population hybrids of Astyanax fasciatus and Poecilia mexicana (Pisces, Characidae)

Hoffman, S. and Hausberg, C. (1993)

The aggressive behaviour of the Micos cave population (Astyanax fasciatus, Characidae, Teleostei) after selection for functional eyes in comaprison to an epigean one

Wilkens, H., Langecker, T. G. and Olcese, J. (1993)

Circadian rhythms of melatonin synthesis in the pineal organ of cave-dwelling astyanax fasciatus (Teleostei: Characidae)

Wilkens, H. (1993)

Neutral mutationen und evolutionäre Fortentwicklung

Teyke, T. and Schaerer, S. (1994)

Blind Mexican cave fish (Astyanax hubbsi) respond to moving visual stimuli

Hausberg, C. (1994)

The aggressive bahaviour of the blind cave-dwelling population of the characid Astyanax fasciatus (Teleostei, Characidae)

Missall, J., Wilkens, H., Langecker, T. G. and Olcese, J. (1994)

Studies on melatonin rhythmicity in a species of cave fish and its surface ancestor Astyanax fasciatus (Cuvier, 1819) (Characidae)

Missal, J, Wilkens, H, Langecker, TG and Olcese, 1994 (1994)

Studies on melatonin rhythmicity in a species of cave fish and its surface ancestor Astyanax fasciatus (Cuvier, 1819) (Characidae).

Borowsky, R. (1994)

Blind cave tetras of the Sierra Madre Oriental

Montgomery, J., Coombs, S. and Halstead, M. (1995)

Biology of the mechanosensory lateral line in fishes

Yokoyama, R, Knox, BE and Yokoyama, S (1995)

Rhodopsin from the fish Astyanax: Role of Tyrosine 261 in the red shift

Langecker, T. G., Neumann, B., Hausberg, C. and Parzefall, J. (1995)

Evolution of the optical releasers for aggressive behaviour in cave-dwelling Astyanax fasciatus (Teleostei, Characidae)

Hausberg, C (1995)

Das Aggressionsverhalten von Astyanax fasciatus (Cuvier, 1819) Characidae Teleostei: Ontogenie, Genetik und evolution bei der epigaischen und hypogaischen Form

Langecker, T. G., Wilkens, H. and Schmale, H. (1995)

Developmental constraints in regressive evolution: Studies of the expression of the delta-s crystallin gene in the developing lens of cave-dwelling Astaynax fasciatus (Cuvier, 1819) (Teleostei, Characidae) by in situ hybridisation

Yokoyama, S., Meany, A., Wilkens, H. and Yokoyama, R. (1995)

Initial mutational steps towards loss of opsin gene function in cavefish

Jeffery, W.R., Hornaday, K. and Martasian, D.P. (1996)

Eye development in the cavefish Astyanax: Role of programmed cell death and the Pax-6 gene. (Abstract).

Wilkens, H. and Langecker, T. G. (1996)

Vom Leben im ewigen Dunkel. Zur Evolution der Hohlenfische

Borowsky, R. (1996)

The Sierra de El Abra of Northeastern Mexico: blind fish in the worlds largest cave system

Borowsky, R. and Espinasa, L. (1997)

Antiquity and origins of troglobitic Mexican tetras, Astyanax fasciatus

Riedel, G. and Krug, L. (1997)

The forebrain of the blind cave fish Astyanax hubbsi (Characidae). II. Projections of the olfactory bulb

Jeffery, W.R. and Martasian, D P. (1997)

Evolution of eye development in the cavefish Astyanax

Behrens, M., Langecker, T.G., Wilkens, H. and Schmale, H. (1997)

Comparative analysis of Pax-6 sequence and expression in the eye development of the blind cavefish Astyanax fasciatus and its epigean conspecific

Riedel, G. (1997)

The forebrain of the blind cave fish Astyanax hubbsi (Characidae). I. General anatomy of the telencephalon

Jeffery, W.R. and Martasian, D.P. (1998)

Evolution of eye regression in the cavefish Astyanax: apoptosis and the Pax-6 gene

Contreras-Balderas, S. and Lozano-Vilano, M.D.L. (1998)

Problemas nomenclaturales de las formas mexicanas del genero Astyanax (Pisces: Characidae)

Jeffery, W.R. (1998)

Evolution of eye regression in the cavefish Astyanax: Apoptosis and the Pax-6 gene

Wilkens, H. (1998)

Genetics of cave fishes

Riedel, G. (1998)

Long-term habituation to spatial novelty in blind cave fish (Astyanax hubbsi): role of the telencephalon and its subregions

Behrens, M., Wilkens, H. and Schmale, H. (1998)

Cloning of the alpha A-crystallin genes of a blind cave form and the epigean form of Astyanax mexicanus: a comparative analysis of structure, expression and evolutionary conservation

Wilkens, H. (1998)

Genetics of cave fish evolution

Natke, C. (1999)

Vergleichende Untersuchungen am optischen System von Fluss- und Hohlenform des Silbersalmlers Astyanax mexicanus (Characidae, Teleostei): Faserdarstellung mit Hilfe fluoreszierender Carbocyanine

Kullander, S. O. (1999)

Fish species - how and why

Villalobos, J.L., Alvarez, F. and Iliffe, T.M. (1999)

New species of troglobitic shrimps from Mexico, with the description of Troglomexicanus, new genus (Decapoda: Palaemonidae)

Estrada, M. (1999)

The ecology and life history of the mexican tetra, Astyanax mexicanus, (Teleostei: Characidae) in the lower Rio Grande Valley, Texas

Baker, C.F. and Montgomery, J. (1999)

The sensory basis of rheotaxis in the blind Mexican cave fish, Astyanax fasciatus

Pennisi, E. (2000)

Embryonic lens prompts eye development

Espinasa, L. and Borowsky, R. (2000)

Eyed cave fish in a karst window

Jeffery, W.R., Strickler, A.G., Guiney, S., Heyser, D.G. and Tomarev, S.I. (2000)

Prox1 in eye degeneration and sensory organ compensation during development and evolution of the cavefish Astyanax

Yamamoto, Y. and Jeffery, W.R. (2000)

Central role for the lens in cave fish eye degeneration

Huppop, K. (2000)

How do cave animals cope with the food scarcity in caves?

Ford, D.C. (2000)

5.3.1. Deep phreatic caves and groundwater systems of the Sierra de El Abra, Mexico

Langecker, T.G. (2000)

The effects of continuous darkness on cave ecology and cavernicolous evolution

Jeffery, W.R. (2001)

Cavefish as a model system in evolutionary developmental biology

Yokoyama, S, and Radlwimmer, F.B. (2001)

The molecular genetics and evolution of red and green color vision in vertebrates

Boudriot, F and Reutter, K (2001)

Ultrastructure of the taste buds in the blind cave fish Astyanax jordani ("Anoptichthys") and the sighted river fish Astyanax mexicanus (Teleostei, Characidae)

Espinasa, L. and Borowsky, R. (2001)

Origins and relationships of cave populations of the blind Mexican tetra, Astyanax fasciatus, in the Sierra de El Abra

Montgomery, J.C., Coombs, S. and Baker, C.F. (2001)

The mechanosensory lateral line system of the hypogean form of Astyanax fasciatus

Parzefall, J and Hausberg, C (2001)

Ontogeny of the agressive behaviour in epigean and hypogean populations of Astyanax fasciatus (Characidae, teleostei) and their hybrids

Espinasa, L., Rivas-Manzano, P. and Perez, H.E. (2001)

A new blind cave fish population of genus Astyanax: Geography, morphology and behaviour

Espinasa, L. (2001)

Agressive behaviour and blindness: The cave of troglobitic "Astyanax" populations

Leclerc, P., Deharveng, L., Ng, P.K.L., Juberthie, C. and Decu, V. (2001)

Indonesie

Jeffery, W.R. and Yamamoto, Y. (2001)

Midline signaling by sonic hedgehog controls eye degeneration in Astyanax cavefish

Yamamoto, Y. and Jeffery, W.R. (2001)

[Erratum for: Central role for the lens in cavefish eye degeneration. Science 289:831-833]

Strickler, A.G., Yamamoto, Y. and Jeffery, W.R. (2001)

Early and late changes in Pax6 expression accompany eye degeneration during cavefish development

Strickler, A.G., Famuditimi, K. and Jeffery, W.R. (2002)

Retinal homeobox genes and the role of cell proliferation in cavefish eye degeneration

Wilkens, H (2002)

Convergence of Astyanax cave fish evolution: Genetic evidence from eye reduction

Yamamoto, Y. and Jeffery, W.R. (2002)

Probing teleost eye development by lens transplantation

Borowsky, RL and Wilkens, H (2002)

Mapping a cave fish genome: Polygenic systems and regressive evolution

Krejca, J. (2002)

Recent field investigations of blind Astyanax

Carvalho, M.L., Oliveira, C., Navarrete, M.C., Froehlich, O. and Foresti, F. (2002)

Nuclear DNA content determination in Characiformes fish (Teleostei, Ostariophysi) from the Neotropical region

Parzefall, J and Hausberg, C (2002)

Ontogeny of the agressive behaviour in epigean and hypogean populations of Astyanax fasciatus (Characidae, Teleostei) and their hybrids

Berg, A. and Watson, G.M. (2002)

Rapid recovery of sensory function in blind cave fish treated with anemone repair proteins

Coombs, S, New, JG and Nelson, M (2002)

Information-processing demands in electrosensory amd mechanosensory lateral line systems

Romero, A., Jeffery, W.R. and Yamamoto, Y. (2002)

When cave fish see the light: Reaction norm to light exposure during development in epigean, troglomorphic, and hybrids of Astyanax fasciatus (Charicidae)

Strecker, U. and Wilkens, H. (2002)

Genetic divergence between cave and surface populations of Astyanax in Mexico

Dowling, T.E., Martasian, D.P. and Jeffery, W.R. (2002)

Evidence for multiple genetic forms with similar eyeless phenotypes in the blind cavefish, Astyanax mexicanus

Porter, M.L. and Crandall, K.A. (2003)

Lost along the way: the significance of evolution in reverse

Parry, J.W.L., Peirson, S. and Wilkens, H. (2003)

Multiple photopigments from the Mexican blind cavefish, Astyanax fasciatus: a microspectrophotometric study

Espinasa, L. and Jeffery, W.R. (2003)

A troglomorphic sculpin (Pisces: Cottidae) population: Geography, morphology and conservation status

Espinasa, L. and Jeffery, W.R. (2003)

Scientists restore eyes in blind cave fish and find virgin passage

Angel, T.B. (2003)

The neural connectivity of the Torus Semicircularis in the cave dwelling form of Astyanax fasciatus

Sarma, S.S.S., Lopez-Romulo, A. and Nandini, S. (2003)

Larval feeding behaviour of blind fish Astyanax fasciatus (Characidae), black tetra Gymnocorymbus ternetzi (Characidae) and angel fish Pterophyllum scalare (Cichlidae) fed zooplankton

Wilkens, H. and Strecker, U. (2003)

Convergent evolution of the cavefish Astyanax (Characidae, teleostei): Genetic evidence from reduced eye-size and pigmentation

Contreras-Balderas, S, Almada-Villela, P, Lozano-Vilano, M de L and Garcia-Ramirez, ME (2003)

Freshwater fish at risk or extinct in Mexico

Jeffery, W.R., Strickler, A.G. and Yamamoto, Y. (2003)

To see or not to see: Evolution of eye degeneration in Mexican blind cavefish

Yamamoto, Y., Espinasa, L., Stock, D.W. and Jeffery, W.R. (2003)

Development and evolution of craniofacial patterning is mediated by eye-dependant and -independent processes in the cavefish Astyanax

Valdez-Moreno, M. and Contreras-Balderas, S. (2003)

Skull osteology of the characid fish Astyanax mexicanus (Teleostei: Characidae)

Romero, A., Green, S.M., Lelonek, M.M. and Stropnicky, K.C. (2003)

One eye but no vision: cavefish with induced eyes do not respond to light

Strecker, U. (2003)

Polymorphic microsatellites isolated from the cave fish Astyanax fasciatus

Strecker, U., Bernatchez, L. and Wilkens, H. (2003)

Genetic divergence between cave and surface populations of Astyanax in Mexico (Characidae, Teleostei)

Burt de Perera, T. (2004)

Fish can encode order in their spatial map

Wilkens, H (2004)

The Astyanax model (Teleostei): neutral mutations and directional selection

Moreira, C.R., Bichuette, M.E., Oyakawa, O.T., de Pinna, M.C.C. and Trajano, E. (2004)

Rediscovery of Stygichthys typhlops Brittan and Bohlke, 1965, an enigmatic subterranean characiform fish from Jaiba karst area, eastern Brazil

Burt de Perera, T. (2004)

Spatial parameters encoded in the spatial map of the blind mexican cavefish, Astyanax fasciatus

McCauley, D.W., Hixon, E. and Jeffery, W.R. (2004)

Evolution of pigment cell regression in the cavefish Astyanax: a late step in melanogenesis

Jeffery, W.R. (2004)

The hypogean phenotype is controlled by pleiotropic midline-signalling genes in the cavefish Astyanax mexicanus

Yamamoto, Y (2004)

Cavefish

Fuiman, L.A., Higgs, D.M. and Poling, K.R. (2004)

Changing structure and function of the eye and lateral line system of fishes during development

Yamamoto, Y., Stock, D.W. and Jeffery, W.R. (2004)

Hedgehog signalling controls eye degeneration in blind cavefish

Hooven, T.A., Yamamoto, Y. and Jeffery, W.R. (2004)

Blind cavefish and heat shock protein chaperones: a novel role for hsp90alpha in lens apoptosis

Soares, D., Yamamoto, Y., Strickler, A.G. and Jeffery, W.R. (2004)

The lens has a specific influence on optic nerve and tectum development in the blind cavefish Astyanax

Strecker, U., Faundez, V.H. and Wilkens, H. (2004)

Phylogeography of surface and cave Astyanax (Teleostei) from Central and North America based on cytochrome b sequence data

Fish, J. (2004)

Karst hydrology of the Sierra de El Abra

Trapani, J., Yamamoto, Y. amd Stock, D.W. (2005)

Ontogenetic transition from unicuspid to multicuspid oral dentition in a teleost fish: Astyanax mexicanus, the Mexican tetra (Ostariophysi: Characidae)

Kocher, T.D., Jeffery, W.R., Parichy, D.M., Peichel, C.L., Streelman, J.T. and Thorgaard, G.H. (2005)

Special Feature—Roundtable discussion. Fish models for studying adaptive evolution and speciation

Jeffery, W.R. (2005)

Evolution of eye degeneration in cavefish: The return of pleiotropy

Jeffery, W.R. (2005)

Adaptive evolution of eye degeneration in the Mexican blind cavefish

Espinasa, L., Yamamoto, Y. and Jeffery, W.R. (2005)

Non-optical releasers for aggressive behaviour in blind and blinded Astyanax (Teleostei: Characidae)

Espinasa, L. and Espinasa, M. (2005)

Why do cave fishes lose their eyes? A Darwinian mystery unfolds in the dark

Tian, N.M.M.L. and Price, D.J. (2005)

Why cavefish are blind

Burt de Perera, T and Braithwaite, VA (2005)

Laterality in a non-visual sensory modality - the lateral line of fish

Espinasa, L. and Espinasa, M. (2005)

Why do cavefish lose their eyes?

Panaram, K. and Borowsky, R.L. (2005)

Gene flow and genetic variability in cave and surface populations of the Mexican tetra, Astyanax mexicanus (Teleostei: Characidae)

Plath, M., Rohde, M., Schroder, T., Taebel-Hellwig, A. and Schlupp, I. (2006)

Female mating preferences in blind cave tetras Astyanax fasciatus (Characidae, Teleostei)

Protas, M.E., Hersey, C., Kochanek, D., Zhou, Y., Wilkens, H., Jeffery, W.R., Zon, L.I., Borowsky, R. and Tabin, C.J. (2006)

Genetic analysis of cave fish reveals molecular convergence in the evolution of albinism

Espinasa, L. and Jeffery, W.R. (2006)

Conservation of retinal circadian rhythms during cavefish eye degeneration

Jeffery, W.R. (2006)

Convergence of pigment regression in cave animals: developmental, biochemical and genetic progress towards understanding evolution of the colourless phenotype

Franz-Odendaal, T.A. and Hall, B.K. (2006)

Modularity and sense organs in the blind cavefish, Astyanax mexicanus

Jeffery, W.R. (2006)

Regressive Evolution of Pigmentation in the Cavefish Astyanax

Reeves, R.G. and Bermingham, E. (2006)

Colonization, population expansion, and lineage turnover: phylogeography of Mesoamerican characiform fish.

Di Palma, F., Kidd, C., Borowsky, R. and Kocher, T.D. (2007)

Construction of bacterial artificial chromosome libraries for the Lake Malawi cichlid (Metriaclima zebra), and the blind cavefish (Astyanax mexicanus)

Peleshanko, S, Julian, MD, Ornatska, M, McConney, ME, LeMieux, MC, Chen, NN, Tucker, C, Yang, YC, Liu, C, Humphrey, JAC and Tsukruk, VV (2007)

Hydrogel-encapsulated microfabricated haircells mimicking fish cupula neuromast

Wilkens, H (2007)

Regressive evolution: Ontogeny and genetics of cavefish eye rudimentation

Moreira, C.R. (2007)

Relações filogenéticas na ordem Characiformes (Teleostei: Ostariophysi)

Gregson, J.N.S. and Burt de Perera, T. (2007)

Shoaling in eyed and blind morphs of the characin Astyanax fasciatus under light and dark conditions

Menuet, A., Alunni, A., Joly, J.S., Jeffery, W.R. and Retaux, S. (2007)

Expanded expression of sonic hedgehog in Asyanax cavefish: multiple consequences on forebrain development and evolution

Alunni, A., Menuet, A., Candal, E., Penigault, J.B., Jeffery, W.R. and Retaux, S. (2007)

Developmental mechanisms for retinal degeneration in the blind cavefish Astyanax mexicanus

Protas, M., Conrad, M., Gross, J.B., Tabin, C. and Borowsky, R.L. (2007)

Regressive evolution in the Mexican cave tetra, Astyanax mexicanus

Strickler, A.G., Byerly, M.S. and Jeffery, W.R. (2007)

Lens gene expression analysis reveals downregulation of the anti-apoptotic chaperone alphaA-crystallin during cavefish eye degeneration

Porter, M.L., Dittmar, K. and Perez-Losada, M. (2007)

How long does evolution of the troglomorphic form take? Estimating divergence times in Astyanax mexicanus

Kavalco, K.F. and Almeida-Toledo, L.F. (2007)

Molecular cytogenetics of blind Mexican tetra and comments on the karyotypic characteristics of genus Astyanax (Teleostei, Characidae)

Porter, M.L., Dittmar, K. and Perez-Losada, M (2007)

How long does evolution of the troglomorphic form take? Estimating divergence times in Astyanax mexicanus

Holbrook, R., Bomphrey, R., Walker, S., Taylor, G., Thomas, A. and Burt de Perera, T. (2007)

Swimming performance of a subcarangiform, the blind mexican cave fish (Astyanax fasciatus)

Strickler, A.G., Yamamoto, Y. and Jeffery, W.R. (2007)

The lens controls cell survival in the retina: Evidence from the blind cavefish Astyanax

Borowsky, R.L. (2008)

Are cave populations evolutionary dead ends?

Borowsky, R.L. (2008)

Determining the sex of adult Astyanax mexicanus

Borowsky, R.L. (2008)

Breeding Astyanax mexicanus through natural spawning

Borowsky, R.L. (2008)

In vitro fertilisation of Astyanax mexicanus

Windsor, S.P. (2008)

Hydrodynamic imaging by blind Mexican cavefish

Wilkens, H. (2008)

Genes, modules and the evolution of troglobites

Borowsky, R.L. (2008)

Handling Astyanax mexicanus eggs and fry

Moreira, C.R. and Trajano, E. (2008)

Stygichthys typhlops Brittan and Bohlke, 1965

Yoshizawa, M. and Jeffery, W.R. (2008)

Shadow response in the blind cavefish Astyanax reveals conservation of a functional pineal eye

Retaux, S, Pottin, K and Alunni, A (2008)

Shh and forebrain evolution in the blind cavefish Astyanax mexicanus

Salin, K., Voituron, Y., Colson, C. and Hervant, F. (2008)

To colonise subterranean environments without starvation tolerance capacity: the case of fish Astyanax mexicanus

Jeffery, W.R. (2008)

Developmental relationships between eye regression and constructive traits in Astyanax cavefish

Jeffery, W.R. (2008)

Emerging model systems in evo-devo: cavefish and microevolution of development

Protas, M., Tabansky, I., Conrad, M., Gross, J.B., Vidal, O., Tabin, C. and Borowsky, R.L. (2008)

Multi-trait evolution in a cave fish, Astyanax mexicanus

Gross, J.B., Protas, M., Conrad, M., Scheid, P.E., Vidal, O., Jeffery, W.R., Tabin, C. and others (2008)

Synteny and candidate gene prediction using an anchored linkage map of Astyanax mexicanus

Windsor, S., Mallinson, G. and Montgomery, J. (2008)

Hydrodynamic imaging by blind Mexican cave fish (Astyanax fasciatus)

Windsor, S., Tan, D. and Montgomery, J. (2008)

Swimming kinematics and hydrodynamic imaging in the blind Mexican cave fish (Astyanax fasciatus)

Ornelas-Garcia, C.P., Dominguez-Dominguez, O. and Doadrio, I. (2008)

Evolutionary history of the fish genus Astyanax Baird and Girard (1854) (Actinopterygii, Characidae) in Mesoamerica reveals multiple morphological homoplasies

Yong, E. (2008)

Blind fish see shadows

Borowsky, R. (2008)

Astyanax mexicanus, the blind Mexican cave fish: a model for studies in development and morphology

Holbrook, R., Bomphrey, R., Walker, S., Taylor, G., Thomas, A. and Burt de Perera, T. (2008)

A comparative analysis of the normal swimming performance of two subcarangiforms, blind Mexican cave fish (Astyanax fasciatus) and goldfish (Carassius auratus)

Holbrook, R.I. and Burt de Perera, T. (2008)

Three-dimensional orientation in fish

Aw, J.M., Holbrook, R.I., Burt de Perera, T. and Kacelnik, A. (2008)

Apparent irrationality and state-dependant learning in fish

Espinasa, M. and Espinasa, L. (2008)

Losing sight of regressive evolution

Strecker, U. (2008)

Introgression in Astyanax fasciatus cave populations

Borowsky, R.L. (2008)

Restoring sight in blind cavefish

Borowsky, R.L. (2009)

Emerging model organisms Astyanax mexicanus, the blind Mexican cave fish: A model for studies in development and morphology

Reynoso, V.H., Paredes-Leon, R. and Arroyo Lambaer, D. (2009)

Conservation isues in the blind cave fishes of the genus Astyanax in northeastern Mexico

McHenry, M., Feitl, K. and Cardenas, G. (2009)

Do blind Astyanax have highly sensitive lateral line receptors?

Jeffery, W.R. (2009)

Regresive evolution in Astyanax cavefish

Ornelas-Garcia, C.P., Dominguez-Dominguez, O. and Doadrio, I. (2009)

Phylogeny and biogeography of the genus Astyanax in Mesoamerica

Yoshizawa, M., Soares, D., Goricki, S., Ashida, G. and Jeffery, W.R. (2009)

Evolution of adaptive behaviours in the cavefish Astyanax

Franz-Odendaal, T., Varatharasan, N. and Croll, R.P. (2009)

The development of taste buds in two morphs of Astyanax mexicanus

Yamamoto, Y., Byerly, M.S., Jackman, W.R. and Jeffery, W.R. (2009)

Pleiotropic functions of embryonic sonic hedgehog expression link jaw and tastebud amplification with eye loss during cavefish evolution

Varatharasan, N., Croll, R. and Franz-Odendaal, T. (2009)

Taste bud development and patterning in sighted and blind morphs of Astyanax mexicanus.

Gross, J.B., Borowsky, R. and Tabin, C. (2009)

A novel role for Mc1r in the parallel evolution of depigmentation in independant populations of the cavefish Astyanax mexicanus

Pottin, K and Retaux, S (2009)

Interactions between signalling centres for anterior neural plate patterning in Astyanax

Retaux, S., Alunni, A., Menuet, A. and Pottin, K. (2009)

Why do cavefish first develop eyes? A forebrain deveopment hypothesis

Jeffery, W.R. (2009)

AIM 2009: The first international Astyanax meeting

Porter, M.L., Jeffery, W.R. and Dittmar, K. (2009)

Estimating divergence times in Astyanax mexicanus

Streets, A and Soares, D (2009)

Changes in sensory strategies during development of cavefish

Leclercq, E., Taylor, J.F. and Migaud, H. (2009)

Morphological skin colour changes in teleosts

Kowalko, J., Gross, J.B., Protas, M., Borowsky, R.L. and Tabin, C. (2009)

Genetic approaches to studying morphological and behavioural traits in Astyanax mexicanus

Jeffery, W.R. (2009)

Evolution of eye degeneration in cavefish

Windsor, S. (2009)

Hydrodynamic imaging in blind Mexican cave fish

Jeffery, W.R. (2009)

Evolution and development in the cavefish Astyanax

Culver, D.C. and Pipan, T. (2009)

The biology of caves and other subterranean habitats

Patton, P., Coombs, S. and Windsor, S. (2009)

Active wall following in the Mexican blind cavefish (Astyanax sp.)

Espinasa, L. and Giribet, G. (2009)

Living in the dark—species delimitation based on combined molecular and morphological evidence in the nicoletiid genus Texoreddellia Wygodzinsky, 1973 (Hexapoda: Zygentoma: Nicoletiidae) in Texas and México

Strickler, A.G. and Jeffery, W.R. (2009)

Differentially expressed genes identified by cross-species microarray in the blind cavefish Astyanax

Esquivel Bobadilla, S., Borowsky, R.L., Espinosa Perez, H. and Garcia de Leon, F.J. (2009)

Microsatellite polymorphisms of Astyanax mexicanus at Mexican Atlantic slope

Albertson, R.C., Cresko, W., Detrich, H.W. and Postlethwait, J.H. (2009)

Evolutionary mutant models for human disease

Maher, B. (2009)

Evolution: biology's next top model

Sutherland, L., Holbrook, R.I. and Burt de Perera, T. (2009)

Sensory system affects orientational strategy in a short-range spatial task in blind and eyed morphs of the fish, Astyanax fasciatus

Dufton, M. and Franz-Odendaal, T.A. (2009)

Sensory structures and developmental modules within Astyanax

Aw, J.M., Holbrook, R.I., Burt de Perera, T. and Kacelnik, A. (2009)

State-dependant valuation learning in fish: Banded tetras prefer stimuli associated with greater past deprivation

Sharma, S., Coombs, S., Patton, P. and Burt de Perera, T. (2009)

The function of wall-following behaviours in the Mexican blind cavefish and a sighted relative, the Mexican tetra (Astyanax)

Ren, W.Y. and Yamamoto, Y. (2009)

How cavefish lost their eyes. Midline signalling and eye development

Holbrook, R. and Burt de Perera, T. (2009)

Spatial orientation of two morphs of Astyanax fasciatus

McConney, M.E., Chen, N.N., Lu, D., Hu, H., Coombs, S., Liu, C. and Tsukruk, V.V. (2009)

Biologically inspired design of hydrogel-capped hair sensors for enhanced underwater flow detection

Guibal, C., Yamamoto, Y., Reynoso, V.H. and Whitmore, D. (2009)

Biological clocks in Astyanax mexicanus

Holbrook, R. and Burt de Perera, T. (2009)

Separate encoding of vertical and horizontal components of space during orientation in fish

Coombs, S. and Patton, P. (2009)

Short-range, sensorimotor adaptations for aquiring spatial knowledge

De Carvalho, P.A., Paschoalini, A.L., Santos, G.B., Rizzo, E. and Bazzoli, N. (2009)

Reproductive biology of Astyanax fasciatus (Pisces: Characiformes) in a reservoir in southeastern Brazil.

Whitmore, D., Guibal, C., Tamai, K. and Yamamoto, Y. (2009)

Circadian clocks and light sensitivity in Astyanax cell lines

Van Trump, W.J., Coombs, S., Duncan, K. and McHenry, M. (2010)

Gentamicin disrupts both receptor classes in the lateral line system

Mirande, J.M. (2010)

Phylogeny of the family Characidae (Teleostei: Characiformes): from characters to taxonomy

Coombs. S. (2010)

Active flow-sensing for spatial exploration and navigation

Wilkens, H (2010)

Genes, modules and the evolution of cave fish

Moreira, C.R., Bichuette, M.E., Oyakawa, O.T., de Pinna, M.C.C. and Trajano, E. (2010)

Rediscovery and redescription of the unusual subterranean characiform Stygichthys typhlops, with notes on its life history

Pottin, K., Hyacinthe, C., and Retaux, S. (2010)

Conservation, development, and function of a cement gland-like structure in the fish Astyanax mexicanus

Yoshizawa, M., Goricki, S., Soares, D. and Jeffery, W.R. (2010)

Evolution of a behavioural shift mediated by superficial neuromasts helps cavefish find food in darkness

Gross, J.B. and Tabin, C.J. (2010)

Evolutionary genetics of pigmentation loss

Salin, K., Voituron, Y., Mourin, J. and Hervant, F. (2010)

Cave colonization without fasting capacities: an example with the fish Astyanax fasciatus mexicanus

Jeffery, W.R. (2010)

Pleiotropic tradeoffs between constructive and regressive traits during troglomorphic evolution

Jeffery, W.R. (2010)

Pleiotropy and eye degeneration in cavefish

Patton, P., Windsor, S. and Coombs, S. (2010)

Active wall following by Mexican blind cavefish (Astyanax mexicanus)

Windsor, S.P., Norris, S.E., Cameron, S.M., Mallinson, G.D. and Montgomery, J.C. (2010)

The flow fields involved in hydrodynamic imaging by blind Mexican cave fish (Astyanax fasciatus). Part II: gliding parallel to a wall.

Windsor, S.P., Norris, S.E., Cameron, S.M., Mallinson, G.D. and Montgomery, J.C. (2010)

The flow fields involved in hydrodynamic imaging by blind Mexican cave fish (Astyanax fasciatus). Part I: open water and heading towards a wall.

Jeffery, W.R. and Strickler, A.G. (2010)

Development as an evolutionary process in Astyanax cavefish

Juan, C., Guzik, M.T., Jaume, D. and Cooper, S.J.B. (2010)

Evolution in caves: Darwin’s ‘wrecks of ancient life’ in the molecular era

Taylor, G.K., Holbrook, R. and Burt de Perera, T. (2010)

Fractional rate of change of swim-bladder volume is reliably related to absolute depth during vertical displacements in teleost fish

Van Trump, W.J., Coombs, S., Duncan, K. and McHenry, M.J. (2010)

Gentamicin is ototoxic to all hair cells in the fish lateral line system

Gatenby, R.A., Gillies, R.J. and Brown, J.S. (2011)

Of cancer and cave fish

Holbrook, R. and Burt de Perera, T. (2011)

Fish navigation in the vertical dimesion: can fish use hydrostatic pressure to determine depth?

Ornelas-Garcia, C.P., Pedraza-Lara, C.P., Bastir, M. and Doadrio, I. (2011)

Parallel adaptive divergence in a characid fish genus Asyanax Baird and Girard (1854) from Catemaco Lake (Mexico)

Kish, P.E., Bohnsack, B.L., Gallina, D., Kasprick, D.S. and Kahana, A. (2011)

The eye as an organizer of craniofacial development

Gallo, N.D. and Jeffery, W.R. (2011)

Variance of space dependant growth in Astyanax mexicanus

Esquivel-Bobadilla, S (2011)

Análisis genético de Astyanax mexicanus (Characidae, Teleostei, Pisces) de la vertiente atlántica de México usando microsatélites.

Duboue, E.R. and Borowsky, R.L. (2011)

Evolutionary convergence on sleep loss in cavefish populations

Duboue, E.R., Keene, A. and Borowsky, R. (2011)

Evolutionary convergence on sleep loss in cavefish populations

Yoshizawa M. and Jeffery, W.R. (2011)

Evolutionary tuning of an adaptive behavior requires enhancement of the neuromast sensory system

Vazquez-Echeverria, C., Guibal, C., Reynoso, V.H., Carrillo-Rosas, S., Ramos-Balderas, J.L. and Maldonado, E. (2011)

Cloning ear development related genes in Astyanax mexicanus

Yoshizawa, M. and Jeffery, W.R. (2011)

Evolution of a behaviour mediated by the lateral line system adapts Astyanax to life in darkness

Legendre, L., Elipot, Y., Hinaux, H., Pere, S., Sohm, F. and Retaux, S. (2011)

I-Scel mediated transgenesis in Astyanax model

Kowalko, J., Rohner, N., Borowsky, R.L. and Tabin, C. (2011)

Cave fish as a model to elucidate the genetic basis of the evolution of behaviour

Salin, K., Voituron, Y., Mourin, J. and Hervant, F. (2011)

Cave colonisation without fasting capacities: An example with the fish Astyanax fasciatus mexicanus

Hinaux, H and Retaux, S (2011)

Placode development in Astyanax mexicanus blind cavefish and sighted surface fish

Hinaux, H., Fartman, B., DaSilva, C., Noirot, C. and Jeffery, W.R. (2011)

Astyanax mexicanus cavefish and surface fish cDNA libraries

Jeffery, W.R. and Bilandzija, H. (2011)

Convergent evolution of albinism in cave animals: A defect in the first step of melanin biosynthesis in troglomorphic fishes and insects

Retaux, S, Pottin, K and Hyacinthe, C (2011)

The nature and function of the Astyanax casquette

Retaux, S (2011)

Projection of a movie promoting Astyanax as a model system

Bradic, M., Beerli, P. and Borowsky, R.L. (2011)

Population genetic evidence for convergance and parallelism in the Mexican blind cavefish (Astyanax mexicanus)

Pottin, K., Hinaux, H. and Retaux, S. (2011)

Restoring eye size in Astyanax mexicanus blind cavefish embryos through modulation of the Shh and Fgf8 forebrain organising centres

Oliveira, C., Avelino, G.S., Abe, K.T., Mariguela, T.C., Benine, R.C., Orti, G., Vari, R.P. and Correa e Castro, R.M. (2011)

Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling

Lechner, W. and Ladich, F. (2011)

How do albino fish hear?

Espinasa, L. (2011)

Promoting undergraduate research in large classrooms: Guerrero cave Astyanax - Old or young colonisation?

Cavallari, N., Frigato, E., Vallone, D., Froehlich, N., Lopez-Olmeda, J.F., Foa, A., Berti, R., Sanchez-Vazquez, F.J., Bertolucci, C. and Foulkes, N.S. (2011)

A blind circadian clock in cavefish reveals that opsins mediate peripheral clock photoreception

Kasumyan, A.O. (2011)

Tactile reception and behavior of fish

Ma, L and Jeffery, WR (2011)

The function of alphaA-Crystallin in lens degeneration in Astyanax mexicanus cavefish

Wilkens, H. (2011)

Variability and loss of functionless traits in cave animals. Reply to Jeffery (2010)

Windsor, S., Paris, J. and Burt de Perera, T. (2011)

No role for direct touch using the pectoral fins, as an information gathering strategy in blind fish

Strickler, A.G. and Soares, D. (2011)

Comparative genetics of the central nervous system in epidean and hypogean Astyanax mexicanus

Elipot, Y., Callebert, J., Hinaux, H. and Retaux, S. (2011)

Linking evolution of the aggressive behaviour and the serotogenic system in Astyanax mexicanus surface fish and blind cavefish populations

Pottin, K., Hinaux, H., Elipot, Y., Chaloub, H., Pere, S. and Retaux, S. (2011)

A developmental staging table for Astyanax mexicanus

Schobert, C.S., Stiassny, M.L.J., Jeffery, W.D. and Dubielzig, R.R. (2011)

Comparative ocular anatomy In troglomorphic fish: Sensory compensation for reduced vision

Hinaux, H., Pottin, K., Chalhoub, H., Pere, S., Elipot, Y., Legendre, L. and Retaux, S. (2011)

A developmental staging table for Astyanax mexicanus surface fish and Pachon cavefish

Yamamoto, Y. and Jeffery, W.R. (2011)

Blind cavefish

Hausdorf, B., Wilkens, H. and Strecker, U. (2011)

Population genetic patterns revealed by microsatellite data challemge the mitochondrial DNA based taxonomy of Astyanax in Mexico (Characidae, Teleostei)

Holbrook, R. and Burt de Perera, T. (2011)

Three-dimensional spatial cognition: information in the vertical dimension overrides information from the horizontal

Tan, D., Patton, P. and Coombs, S. (2011)

Do blind cavefish have behavioural specializations for active flow-sensing?

Franck, D (2012)

Curt Kosswig. Ein Forscherleben zwischen Bosporus und Elbe

Dufton, M., Hall, B.K. and Franz-Odendaal, T. (2012)

Early lens ablation causes dramatic long-term effects on the shape of bones in the craniofacial skeleton of Astyanax mexicanus

Yoshizawa, M., Ashida, G. and Jeffery, W.R. (2012)

Parental genetic effects in a cavefish adaptive behavior explain disparity between nuclear and mitochondrial DNA

Gallo, N.D. and Jeffery, W.R. (2012)

Evolution of space dependent growth in the teleost Astyanax mexicanus

Gross, J. B. and Wilkens, H. (2012)

Evolution of albinism in a captive population of cavefish

Jeffery, W.R. (2012)

Astyanax mexicanus: A model organism for evolution and adaptation

Duboue, E.R., Borowsky, R.L. and Keene, A.C. (2012)

Beta-adrenergic signaling regulates evolutionarily derived sleep loss in the Mexican cavefish

Duboue, E.R. and Borowsky, R. (2012)

Altered rest-activity patterns evolve via circadian independent mechanisms in cave adapted balitorid loaches

Mogdans, J. and Bleckmann, H. (2012)

Coping with flow: behavior, neurophysiology and modeling of the fish lateral line system

Gross, J.B. (2012)

The complex origin of Astyanax cavefish

Hervant, F. (2012)

Starvation in subterranean species versus surface-dwelling species: Crustaceans, Fish, and Salamanders

Protas, M. and Jeffery, W.R. (2012)

Evolution and development in cave animals: from fish to crustaceans

Bradic, M., Beerli, P., Garcia-de Leon, F.J., Esquivel-Bobadilla, S. and Borowsky, R.L. (2012)

Gene flow and population structure in the Mexican blind cavefish complex (Astyanax mexicanus)

Pipan, T. and Culver, D.C. (2012)

Convergence and divergence in the subterranean realm: a reassessment.

Porter, M.L., Blasic, J.R., Bok, M.J., Cameron, E.G., Pringle, T., Cronin, T.W. and Robinson, P.R. (2012)

Shedding new light on opsin evolution

Hoke, K., Schwartz, A. and Soares, D. (2012)

Evolution of the fast start response in the cavefish Astyanax mexicanus

Huppop, K. (2012)

Adaptation to low food

Idda, M.L., Bertolucci, C., Vallone, D., Gothilf, Y., Sánchez-Vázquez, F.J. and Foulkes N.S. (2012)

Circadian clocks: lessons from fish

Wilkens, H. (2012)

Neutral mutations

Trontelj, P. (2012)

Natural selection

Yoshizawa, M., Yamamoto, Y., O'Quin, K.E. and Jeffery, W.R. (2012)

Evolution of an adaptive behavior and its sensory receptors promotes eye regression in blind cavefish

Strecker, U., Hausdorf, B. and Wilkens, H. (2012)

Parallel speciation in Astyanax cave fish (Teleostei) in Northern Mexico

Hinaux, H., Poulain, J., Da Silva, C., Noirot, C., Jeffery, W.R., Casane, D. and Rétaux, S. (2013)

Transcriptome analysis in Astyanax mexicanus blind cavefish and sighted surface fish

Wall, A. and Volkoff, H. (2013)

Effects of fasting and feeding on the brain mRNA expressions of orexin, tyrosine hydroxylase (TH), PYY and CCK in the Mexican blind cavefish (Astyanax fasciatus mexicanus)

Krutzler, A.J., Bruns, L.E. and Gross, J.B. (2013)

Fragmentation, fussion and asymmetry in the craniofacial skeleton of Astyanax mexicanus

Keene, A. (2013)

Metabolic regulation of sleep in A. mexicanus

Borowsky, R. (2013)

Divergence and speciation in Astyanax of the Sierra de El Abra

Legendre, L., Elipot, Y., Hinaux, H., Pere, S., Sohm, F. and Retaux, S. (2013)

Transgenesis methods in Astyanax

Van Trump, W.J. and McHenry, M.J. (2013)

The lateral line system is not necessary for rheotaxis in the Mexican blind avefish (Astyanax fasciatus)

Atukorala, A.D.S., Hammer, C., Dufton, M. and Franz-Odendaal, T.A. (2013)

Adaptive evolution of the lower jaw dentition in Mexican tetra (Astyanax mexicanus)

Gross, J.B. and Wilkens, H. (2013)

Albinism in phylogenetically and geographically distinct populations of Astyanax cavefish arises through the same loss-of-function Oca2 allele

Beale, A., Guibal, C., Tamai, T.K., Klotz, L., Cowen, S., Peyric, E., Reynoso, V.H., Yamamoto, Y. and Whitmore, D. (2013)

Circadian rhythms in Mexican blind cavefish Astyanax mexicanus in the lab and in the field

Borowsky, R.L. (2013)

Evolution of an adaptive behaviour and its sensory receptors facilitates eye regression in blind cavefish

Borowsky, R. and Cohen, D. (2013)

Genomic consequences of ecological speciation in Astyanax cavefish

Beale, A. (2013)

The circadian clock of the Mexican blind cavefish, Astyanax mexicanus

O'Quin, K.E., Yoshizawa, M., Doshi, P. and Jeffery, W R. (2013)

Quantitative genetic analysis of retinal degeneration in the blind cavefish Astyanax mexicanus

Elliott, W.R. (2013)

Astyanax: Looking back 45 years

Yoshizawa, M., O'Quin, K.E. and Jeffery, W.R. (2013)

Evolution of an adaptive behavior and its sensory receptors promotes eye regression in blind cavefish: response to Borowsky (2013)

Rétaux, S., Bourrat, F., Joly, J.-S. and Hinaux, H., (2013)

Perspectives in evo-devo of the vertebrate brain

Yoshizawa, M., O'Quin, K.E., Ashida, G. and Jeffery, W.R. (2013)

Adaptive changes in vibration attraction behaviour and its sensory receptors promote eye degeneration and disparity between the nuclear and mitochondrial genomes in Pachon cavefish

Yoshizawa, M., O’Quin, K.E., and Jeffery, W.R. (2013)

QTL clustering as a mechanism for rapid multi-trait evolution

Kowalko, J.E., Rohner, N., Rompani, S.B., Peterson, B.K., Linden, T.A., Yoshizawa, M., Kay, E.H., Weber, J., Hoekstra, H.E., Jeffery, W.R., Borowsky, R. and Tabin, C.J. (2013)

Loss of schooling behavior in cavefish through sight-dependent and sight-independent mechanisms

Friedrich, M. (2013)

Biological Clocks and Visual Systems in Cave-Adapted Animals at the Dawn of Speleogenomics

Hinaux, H., Poulain, J., Da Silva, C., Noirot, C., Jeffery, W. R., Casane, D. and Retaux, S. (2013)

De novo sequencing of Astyanax mexicanus surface fish and Pachon cavefish transcriptomes reveals enrichment of mutations in cavefish putative eye genes

Rohner, N., Jarosz, D.F., Kowalko, J.E., Yoshizawa, M., Jeffery, W.R., Borowsky, R.L., Lindquist, S. and Tabin, C.J. (2013)

Cryptic variation in morphological evolution: HSP90 as a capacitor for loss of eyes in cavefish

Bilandzija, H., Ma, L., Parkhurst, A. and Jeffery, W.R. (2013)

A potential benefit of albinism in Astyanax cavefish: Downregulation of the oca2 gene increases Tyrosine and catecholamine levels as an alternative to melanin synthesis

Kowalko, J.E., Rohner, N., Rompani, S.B., Peterson, B.K., Linden, T.A., Yoshizawa, M., Kay, E.H., Weber, J., Hoekstra, H.E., Jeffery, W.R., Borowsky, R. and Tabin, C.J.. (2013)

Genetic analysis of the loss of schooling behavior in cavefish reveals both sight-dependent and independent mechanisms.

Rohner, N., Jarosz, D.F., Taipale, M., Kowalko, J., Yoshizawa, M., Jeffery, W.R., Borowsky, R.L., Lindquist, S. and Tabin, C.J. (2013)

HSP90 as a capacitor for the evolution of eye loss in fish

Retaux, S. and Casane, D. (2013)

Evolution of eye development in the darkness of caves: adaptation, drift, or both?

Gross, J.B., Furterer, A., Carlson, B.M. and Stahl, B.A. (2013)

An integrated transcriptome-wide analysis of cave and surface dwelling Astyanax mexicanus

Bradic, M., Teotonio, H. and Borowsky, R.L. (2013)

The population genomics of repeated evolution in the blind cavefish Astyanax mexicanus

Espinasa, L. (2013)

Pardigm shifts and pendulum swings regarding the origin of Astyanax cavefish: What about geology?

Retaux, S., Elipot, Y., Prunier, L. Hinaux, H. and Blin, M. (2013)

Feed or fight: Delelopmental origin of a behavioural shift in blind cavefish

Stahl, B.A. and Gross, J.B. (2013)

Pigmentation loss in cave animals: A high-resolution study of destructive genetic mutations

Kowalko, J., Rohner, N., Linden, T.A., Rompani S.B., Warren, W.C., Borowsky, R., Tabin, C.J., Jeffery, W.R. and Yoshizawa M. (2013)

Convergence in feeding posture occurs through different loci in independently evolved cave populations of Astyanax mexicanus.

Espinasa, L. and Jeffery, W. (2013)

Caballo Moro breaks Dollo's law: Recuperation of vision in a blind cavefish population

Retaux, S. and Elipot, Y. (2013)

Feed or fight: A behavioral shift in blind cavefish

Stahl, A.L., Stahl, B.A., Buschbeck, E. and Gross, J.B. (2013)

An evaluation of eyelessness in cave dwelling Astyanax mexicanus using RNA-seq technology

Pennisi, E. (2013)

Cavefish study supports controversial evolutionary mechanism

OʼQuin, K.E., Yoshizawa, M., Doshi, P. and Jeffery, W.R. (2013)

Quantitative genetic analysis of retinal degeneration in the blind cavefish A. mexicanus

Ma, L. and Jeffery, W. (2013)

Role of aA-crystallin in Asyanax cavefish eye degeneration

Furterer, A., Carlson, B.M., Stahl, B.A. and Gross, J.B. (2013)

An intergrated transcriptone-wide analysisn of cave and surface dwelling Astyanax mexicanus

Blin, M., Bibliowicz, Y. and Rétaux, S. (2013)

Development of the olfactory system in Astyanax cavefish and surface fish

Bibliowicz, J., Elipot, Y., Blin, M. and Rétaux, S. (2013)

Olfactory evolution in cave-dwelling Astyanax mexicanus

Jeffery, W., Doshi, P., Yoshizawa, M. and O’Quin, K.E. (2013)

Development and genetics of the Astyanax sclera: An optic tissue organised by the lens

Joachim, B.L., Riesch R., and Jeffery, W.R., and Schlupp, I. (2013)

Pignent cell retention in cavernicolous populations of Poecilia mexicana (Poeciliidae)

Rodrigues, F.R. (2013)

Comparison of brain and cranial nerve morphology between eyed surface fish and blind cave fish of the species Astyanax mexicanus.

Bobadilla, S.E., García de León, F.J. and Borowsky, R. (2013)

Genetic structure of Astyanax mexicanus at Mexican Atlantic slope

Borowsky, R. (2013)

Eye regression in blind Astyanax cavefish may facilitate the evolution of an adaptive behavior and its sensory receptors

Vazquez, A.O.S., Bárcenas-Luna, R. and Arellano-Carbajal, F. (2013)

Comparative phylogenies of monogenean parasites and their host Astyanax mexicanus

Stemmer, M., Schuhmacher, L.-N., Foulkes, N.S., Bertolucci, C. and Wittbrodt, J. (2013)

Unravelling continuous eye growth in teleosts by studying blind cavefish

Pazza, R., Bertollo, L.A.C., de Almeida-Toledo, L.F. and Kavalco, K.F. (2013)

Molecular systematics of the genus Astyanax - Starter edition

Garcia-Gonzalez, O.M. and Arellano-Carbajal, F. (2013)

Isolation and characterization of V1r pheromone receptor gene in cave and surface variants of Astyanax mexicanus

Gunter, H. and Meyer, A. (2013)

Trade-offs in cavefish sensory capacity

Gross, J. B., Krutzler, A.J. and Espinasa, L. (2013)

An analysis of structural mutations in the gene Mc1r in surface and Granadas cave-dwelling Astanax aeneus

Gross, J.B., Krutzler, A.J. and Bruns, L.E. (2013)

Genetic analysis of dermal bone fragmentation in a natural model system

Elipot, Y., Hinaux, H., Callebert, J. and Retaux, S. (2013)

Evolutionary shift from fighting to foraging in blind cavefish through changes in the serotonin network

Bibliowicz, J., Alie, A., Espinasa, L., Yoshizawa, M., Blin, M., Hinaux, H., Legendre, L., Pere, S. and Retaux, S. (2013)

Differences in chemosensory response between eyed and eyeless Astyanax mexicanus of the Rio Subterraneo cave

Gross, J. B. and Matthews, M (2013)

An analysis of gene expression level changes across development in surface and cave dwelling fish

Gross, J.B., Krutzler, A.J. and Carlson, B.M. (2014)

Complex craniofacial changes in blind cave-dwelling fish are mediated by genetically symmetric and asymmeric loci

Montgomery, J., Bleckmann, H. and Coombs, S. (2014)

Sensory ecology and neuroethology of the lateral line

Coombs, S., Bleckmann, H., Fay, R.R. and Popper, A.N. (2014)

The Lateral Line System

Holzman, R., Perkol-Finkel, S. and Zilman, G. (2014)

Mexican blind cavefish use mouth suction to detect obstacles

Bleckmann, H., Mogdans, J. and Coombs, S.L. (2014)

Flow sensing in air and water. Behavioral, neural and engineering principles of operation

Espinasa, L., Bartolo, N.D. and Newkirk, C.E. (2014)

DNA sequences of troglobitic nicoletiid insects supports Sierra de El Abra and the Sierra de Guatemala as a single biogeographic area: Implications for Astyanax

Atukorallaya, D. and Franz-Odendaal, T. (2014)

Astyanax mexicanus-A novel model of tooth shape formation and regeneration

Penney, C.C. and Volkoff, H. (2014)

Peripheral injections of cholecystokinin, apelin, ghrelin and orexin in cavefish (Astyanax fasciatus mexicanus): Effects on feeding and on the brain expression levels of tyrosine hydroxylase, mechanistic target of rapamycin and appetite-related hormones

McGaugh, S.E., Gross, J.B., Aken, B., Blin, M., Borowsky, R., Chalopin, D., Hinaux, H., Jeffery, W.R., Keene, A., Ma, L., Minx, P., Murphy, D., O'Quin, K.E., Retaux, S., Rohner, N., Searl, S.M., Stahl, B.A., Tabin, C., Volff, J.N., Yoshizawa M, Warren WC. (2014)

The cavefish genome reveals candidate genes for eye loss

Atukorala, A.D.S. and Franz-Odendaal, T.A. (2014)

Spatial and temporal events in tooth development of Astyanax mexicanus

Trajano, E. and Moreira, C.R. (2014)

Stygichthys typhlops Brittan and Bohlke, 1965 (Teleostei: Characiformes), a phreatobic fish from eastern Brazil: Comments on Sampaio et al. (2012)

Moran, D., Softley, R. and Warrant, E.J. (2014)

Eyeless Mexican cavefish save energy by eliminating the circadian rhythm in metabolism

Schartl, M. (2014)

Beyond the zebrafish: Diverse fish species for modeling human disease.

Elliott, W.R. (2014)

Sotano de Yerbaniz

Elipot, Y., Legendre, L., Pere, S., Sohm, F. and Retaux, S. (2014)

Astyanax transgenesis and husbandry: How cavefish enters the laboratory

Yoshizawa, M., Jeffery, W.R., van Netten, S.M. and McHenry, M.J. (2014)

The sensitivity of lateral line receptors and their role in the behavior of Mexican blind cavefish (Astyanax mexicanus)

Espinasa, L., Bibliowicz, J., Jeffery, W. R. and Retaux, S. (2014)

Enhanced prey capture skills in Astyanax cavefish larvae are independent from eye loss

Espinasa, L., Centone, D.M. and Gross, J.B. (2014)

A contemporary analysis of a loss-of-function oculocutaneous albinism type II (Oca2) allele within the Rio Subterraneo Astyanax cavefish population

Windsor, S.P. (2014)

Hydrodynamic imaging by blind Mexican cavefish

Ma, L., Parkhurst, A. and Jeffery, W.R. (2014)

The role of a lens survival pathway including sox2 and [alpha]A-crystallin in the evolution of cavefish eye degeneration

Coghill, L.M., Hulsey, C.D., Chaves-Campos, J., de Leon, F.J.G. and Johnson, S.G. (2014)

Next generation phylogeography of cave and surface Astyanax mexicanus

Soares, D. Niemiller, M.L. and Higgs, D. (2014)

Review article. Hearing and acoustic communication in cavefishes

Elipot, Y., Hinaux, H., Callebert, J., Launay, J.-M., Blin, M. and Retaux, S. (2014)

A mutation in the enzyme monoamine oxidase explains part of the Astyanax cavefish behavioural syndrome

Palacios-Vargas, J.G., Juberthie, C. and Reddell, J. (2014-2015)

Encyclopaedia Biospeologica Mexico

Carlson, B.M., Onusko, S.W. and Gross, J.B. (2015)

A high-density linkage map for Astyanax mexicanus Using genotyping-by-sequencing technology

Powers, A.K., Sung, J.Y.T. and Gross, J.B. (2015)

Investigating a potential relationship between constructive trait evolution and aberant cranial phenotypes in Asyanax cavefish

Aspiras, A.C., Rohner, N., Martineau, B., Borowsky, R.L. and Tabin, C.J. (2015)

Melanocortin 4 receptor mutations contribute to the adaptation of cavefish to nutrient-poor conditions

Kulpa, M., Bak-Coleman, J. and Coombs, S. (2015)

The lateral line is necessary for blind cavefish rheotaxis in non-uniform flow

Aspiras A.C., Rohner N., Martineau B., Borowsky R.L. and Tabin C.J. (2015)

Melanocortin 4 receptor mutations contribute to the adaptation of cavefish to nutrient-poor conditions

Garcia, O.M., Santacruz, A., Reynoso, V.H. and Maldonado, E. (2015)

Spatial memory experiments in Astyanax mexicabus

Silva, D. M. Z. A., Utsunomia, R., Pansonato-Alves, J.C., Oliveira, C. and Foresti, F. (2015)

Chromosomal mapping of repetitive DNA sequences in five species of Astyanax (Characiformes, Characidae) reveals independent location of U1 and U2 snRNA sites and association of U1 snRNA and 5S rDNA

McGaugh, S. E., Weagley, J., Jeffery, W.R., Yoshizawa, M., O'Quin, K., Espinasa, L., Rohner, N., Borowsky, R. and Warren, W. (2015)

Population genomics of cavefish

Dufton, M. and Franz-Odendaal, T.A. (2015)

Morphological diversity in the orbital bones of two teleosts with experimental and natural variation in eye size

Moran, D., Softley, R. and Warrant, E.J. (2015)

The energetic cost of vision and the evolution of eyeless Mexican cavefish

Tabin, J., Rohner, N., Haro, A., Kowalko, J., Martineau, B., Borowsky, R. and Tabin, C. (2015)

The evolution of temperature in Astyanax

Hammer, C., Atukorala, A.D.S. and Franz‐Odendaal, T. (2015)

Dentition influences shape of oral jaws in fish

Hinaux, H., Blin, M., Fumey, J., Legendre, L., Heuze, A., Casane, D. and Retaux, S. (2015)

Lens defects in Astyanax mexicanus cavefish: Evolution of crystallins and a role for alphaA-crystallin

Fumey, J., Hinaux, H., Noirot, C., Rétaux S. and Casane, D. (2015)

Evidence of late Pleistocene origin of Astyanax mexicanus cavefish

Sumi, K., Asaoka, R., Nakae, M. and Sasaki, K. (2015)

Innervation of the lateral line system in the blind cavefish Astyanax mexicanus (Characidae) and comparisons with the eyed surface-dwelling form

Keene, A. (2015)

Convergent evolution of sleep loss

Hinaux, H., Recher, G., Blin, M., Devos, L., Alié, A. and Rétaux, S. (2015)

Sensory evolution in blind cavefish is driven bt early embryonic events during gasrulation and neurulation

Robinson, B.G., Jaggard, J.B., Yoshizawa, M. and Keene, A.C. (2015)

The evolution of sleep loss in relation to metabolic processes in Mexican cavefish

Reyes, W.D. (2015)

Effects of temperature and water flow on morphology of Astyanax mexicanus (Teleostei: Characidae):

Soares, D. (2015)

Functional imaging of circuits commonly associated with vision processing in the Astyanax blind cavefish

Yoshizawa, M. and Macaspac, C. (2015)

How to build DIY water-flow system that successfully makes a cavefish spawn

Bilandzija, H. (2015)

The loss of body pigmentation has evolved independantly in multiple animal taxa that have successfully colonised subterranean habitats

Kasumyan, A. O. and Marusov, E. A. (2015)

Chemoorientation in the feeding behavior of the blind Mexican cavefish Astyanax fasciatus (Characidae, Teleostei)

Yoshizawa, M. (2015)

Behaviors of cavefish offer insight into developmental evolution.

Caballero-Hernandez, O., Hernandez-Patricio, M., Sigala-Regalado, I., Morales-Malacara, J.B. and Miranda-Anaya, M. (2015)

Circadian rhythms and photic entrainment of swimming activity in cave-dwelling fish Astyanax mexicanus (Actinopterygii: Characidae), from El Sotano La Tinaja, San Luis Potosi, Mexico

Riddle, M. and Tobin, C.J. (2015)

Astyanax mexicanus as a model to study metabolism and the evolution of the digestive system

Stahl, B.A. and Gross, J.B. (2015)

Alterations in Mc1r gene expression are associated with regressive pigmentation in Astyanax cavefish

Bradic, M, Rohner, N, Tabin, C and Borowsky, R. (2015)

Caves with eyed and eyeless populations of Astyanax

Stahl, B.A., Ma, L. and Gross, J.B. (2015)

High resolution genomic mapping reveals genes contributing to complex melaophore variation in Astyanax mexicanus cavefish

Rohner, N., Aspiras, A., Borowsky, R. and Tabin, C. (2015)

Hungry, fat and healthy - Studying the physiological basis of cave adaptation

O’Quin, K.E., Doshi, P., Lyon, A., Hoenemeyer, E., Yoshizawa, M. and Jeffery, W,R. (2015)

Complex evolutionary and genetic patterns characterize the loss of scleral ossification in the Blind cavefish, Astyanax mexicanus

Ma, L., Jeffery, W.R., Essner, J.J. and Kowalko, J.E. (2015)

Genome editing using TALENs in blind Mexican cavefish, Astyanax mexicanus

Hernandez Mena, D., Santacruz Vázquez, A.O., Ornelas García, P., Mendoza Garfias, B., Ponce de León, G.P. (2015)

Endohelminth parasites of the genus Astyanax through its geographical distribution in Mexico

Ma, L. and Jeffery, W.R. (2015)

Molecular analysis of an A. mexicanus eye QTL reveals a potential role of Cystathionine B-synthase A in cavefish eye degeration

Yoshizawa, M., Robinson, B.G., Duboue, E.R., Masek, P., Jaggard, J.B., O'Quin, K.E., Borowsky, R.L., Jeffery, W.R. and Keene, A.C. (2015)

Distinct genetic architecture underlies the emergence of sleep loss and prey-seeking behavior in the Mexican cavefish

Stemmer, M., Schuhmacher, L.-N., Foulkes, N.S., Bertolucci, C. and Wittbrodt, J. (2015)

Cavefish eye loss in response to an early block in retinal differentiation progression

Gross, J.B., Meyer, B. and Perkins, M. (2015)

The rise of Astyanax cavefish

Jaggard, J.B., Robinson, B., Oh, I., Masek, P., Yoshizawa, M. and Keene, A. (2015)

Distinct neural mechanisms underlie the convergent evolution of sleep loss in Astyanax

Devos, L, Alie, A. and Retaux, S. (2015)

Developmental evolution of the basal forebrain in cavefish

Ma, L., Carlson, B., Stahl, B., Powers, M. and Gross, J.B. (2015)

Candidate genes analysis for pigment development in Astyanax cavefish

Retaux, S., Alie, A., Blin, M., Devos, L., Elipot, Y. and Hinaux, H. (2016)

Neural development and evolution in Astyanax mexicanus: Comparing cavefish and surface fish brains

Yamamoto, Y. (2016)

Molecular Mechanisms of Eye Degeneration in Cavefish

Hinaux, H., Retaux, S. and Elipot, Y. (2016)

Social behavior and aggressiveness in Astyanax

Burt de Perera, T., Holbrook, R. and Davis, V. (2016)

The representation of three-dimensional space in fish

Hinaux, H., Devos, L., Blin, M., Elipot, Y., Bibliowicz, J., Alei, A. and Retaux, S. (2016)

Sensory evolution in blind cavefish is driven by early embryonic events during gastrulation and neurulation.

Volkoff, H. (2016)

Feeding behavior, starvation response, and endocrine regulation of feeding in Mexican blind cavefish (Astyanax fasciatus mexicanus)

Cartwright, R.A., Schwartz, R.S., Merry, A.L. and Howell, M.M. (2016)

Strong selection is necessary for evolution of blindness in cave dwellers

Carlson, B.M. and Gross, J.B. (2016)

The unusual suspects: Genetic analysis reveals candidate genes potentially underlying altered activity profiles in the blind Mexican tetra, Astyanax mexicanus

Gross, J.B. and Powers, A.K. (2016)

The evolution of the cavefish craniofacial complex

Gross, J.B., Gangidine, A and Powers, A.K. (2016)

Asymmetric facial bone fragmentation mirrors asymmetric distribution of cranial neuromasts in blind Mexican cavefish

Gross, J.B., Powers, A.K., Davis, E.M. and Kaplan, S.A. (2016)

A pleiotropic interaction between vision loss and hypermelanism in Astyanax mexicanus cave x surface hybrids

Powers, A. Davis, E., Kaplan, S. and Gross, J. (2016)

The evolution of craniofacial shape change in the blind Mexican Cavefish.

Piscor, D. and Parise-Maltempi, P. P. (2016)

Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: syntenic conservation of repetitive genes

Casane, D. and Retaux, S. (2016)

Evolutionary genetics of the cavefish Astyanax mexicanus

Wilkens, H (2016)

Genetics and hybridization in surface and cave Astyanax (Teleostei): a comparison of regressive and constructive traits

Piscor, D., Centofante, L and Parise-Maltempi, P. P. (2016)

Highly similar morphologies between chromosomes bearing U2 snRNA gene clusters in the group Astyanax Baird and Girard 1854 (Characiformes: Characidae): An evolutionary approach in species with 2n=36, 46, 48 and 50

Borowsky, R. (2016)

Regressive evolution: Testing hypotheses of selection and drift

O'Quin, K. and McGaugh, S.E. (2016)

Mapping the genetic basis of troglomorphy in Astyanax: How far we have come and where do we go from here?

Beale, A.D. and Whitmore, D. (2016)

Daily rhythms in a timeless environment: Circadian clocks in Astyanax mexicanus

Beale, A., Whitmore, D. and Moran, D. (2016)

Life in a dark biosphere: A review of circadian physiology in "arrhythmic" environments

Duboue, E.R. and Keene, A.C. (2016)

Investigating the evolution of sleep in the Mexican cavefish

Santacruz, A., Garcia, O.M.., Tinoco-Cuellar, M., Rangel-Huerta, E. and Maldonado, E. (2016)

Spatial mapping in perpetual darkness: EvoDevo of behavior in Astyanax mexicanus cavefish

Atukorala, A.D.S. and Franz-Odendaal, T.A. (2016)

Evolution and Development of the Cavefish Oral Jaws: Adaptations for Feeding

Elliott, W.R. (2016)

Cave biodiversity and ecology of the Sierra de El Abra region

Tabin, C.J. (2016)

Introduction: The Emergence of the Mexican Cavefish as an Important Model System for Understanding Phenotypic Evolution

Elliott, W.R. (2016)

Cave exploration and mapping in the Sierra de El Abra Region

Jeffery, W.R., Ma, L., Parkhurst, A. and Bilandzija, H. (2016)

Pigment regression and albinism in Astyanax cavefish

Yoshizawa, M. (2016)

The evolution of sensory adaptation in Astyanax mexicanus

Bilandžija, H. (2016)

Evolution of melanin pigment regression in cave animals

Bilandžija, H. (2016)

Adaptive differences between dopamine-related locomotor activity in cave and surface dwelling Astyanax mexicanus

Ma, L., Stahl, B., Adams, H. and Gross, J. (2016)

Molecular analysis of melanophore lineage genes in cavefish depigmentation

Shoen, E., Jeffery, W. and Bilandžija, H. (2016)

Adaptive differences between dopamine-related locomotor activity in cave and surface dwelling Astyanax mexicanus

Espinasa, L. and Espinasa, M. (2016)

Hydrogeology of Caves in the Sierra de El Abra Region

Pennisi, E. (2016)

Antisocial cave fish may hold clues to schizophrenia, autism

Hollifield, B., Bilandžija, H. and Jeffery, W. (2016)

Understanding the colonization of caves: Effects of constant darkness on the surface form of Astyanax mexicanus

Martin, L., Bilandžija, H., Soueidan, S. and Jeffery, W. (2016)

The relationship between differential anesthesia tolerance and melanin pigment development in cave-adapted and surface Astyanax mexicanus

Yoshizawa, M., Settle, A., Macaspac, C., Fernandes, V. Yoshida, M. and Keene, A. (2016)

Adaptation through changes of behavioral and morphological traits in Mexican Cavefish

Pennisi, E (2016)

Blind cave fish may provide insights into human health

Schmitter-Soto, J.J. (2016)

A phylogeny of Astyanax (Characiformes: Characidae) in Central and North America

Gross, J.B., Stahl, B.A., Powers, A.K. and Carlson, B.M. (2016)

Natural bone fragmentation in the blind cave-dwelling fish, Astyanax mexicanus: candidate gene identification through integrative comparative genomics

Rohner, N. (2016)

Selection through standing genetic variation

Aspiras, A., Tabin, C. and Rohner, N. (2016)

Astyanax mexicanus as a natural model for metabolic adaptation

Kowalko, J.E., Ma, L. and Jeffery, W.R. (2016)

Genome editing in Astyanax mexicanus using transcription activator-like effector nucleases (TALENs)

Soares, D., Niemiller, M.L. and Higgs, D.M. (2016)

Hearing in Cavefishes

Jeffery, W.R. (2016)

Concluding remarks: The Astyanax community

Rossini, B.C., Oliveira, C.A.M., Melo, F.A.G., Bertaco, V.A., Astarloa, J.M.D., Rosso, J.J., Fauto, F. and Oliveira, C. (2016)

Highlighting Astyanax Species Diversity through DNA Barcoding.

Foulkes, N.S., Whitmore, D., Vallone, D and Bertolucci, C. (2016)

Studying the evolution of the vertebrate circadian clock: The power of fish as compataive models

Jeffery, W.R. (2016)

The comparative organismal approach in evolutionary developmental biology: Insights from ascidians and cavefish

Jeffery, W.R. (2016)

Homocystinuria in Cavefish: Molecular analysis of an Astyanax eye QTL reveals the role of cystathionine ß-synthase in eye degeneration

Keene, A.C., Yoshizawa, M. and McGaugh, S.E. (2016)

Biology and Evolution of the Mexican Cavefish

Lyon, A., Krutzler, A.J., Gross, J.B. and O'Quin, K.E. (2016)

Two to three genes control scleral ossification in blind Astyanax mexicanus cavefish

O'Quin, K.E., Doshi, P., Lyon, A., Hoenemeyer, E., Yoshizawa, M. and Jeffery, W.R. (2016)

The evolution of scleral ossification in the Mexican Cavefish (Astyanax mexicanus)

Gross, J.B. (2016)

Convergence and parallelism in Astyanax cave-dwelling fish

Hinaux, H., Recher, G., Alie, A., Legendre, L., Blin, M. and Retaux, S. (2017)

Lens apoptosis in the Astyanax blind cavefish is not triggered by its small size or defects in morphogenesis

Retaux, S., Bibliowicz, J., Blin, M., Elipot, Y., Espinasa, L., Hinaux, H. and Tine, E. (2017)

Mechanisms underlying the evolution of olfactory capacities in blind cavefish

Krishnan, J., Seidel, C. and Rohner, N. (2017)

Regulatory evolution in cavefish metabolism

Aspiras, A.C., Riddle, M., Zueckert-Gaudenz, K., Peuß, R., Martineau, B., Box, A., Levy, M., Tabin, J.A., McGaugh, S., Borowsky, R., Tabin, C.J. and Rohner, N. (2017)

Insulin resistance in cavefish as an adaptation to a nutrient-poor environment

Fernandes, V., Macaspac, C. and Yoshizawa, M. (2017)

How enhancement of sensory system is integrated to generate adaptive behavior

Kopp, J., Coppola, J. and Espinasa, L. (2017)

Phylogeographical convergence between two troglobitic organisms in the Sierra de El Abra

Cartwright, R.A., Schwartz, R.C., Merry, A.L. and Howell, M.M. (2017)

The importance of selection in the evolution of blindness in cavefish

Riddle, M., Finley, M., Marancik, D., Martineau, B. and Tabin, C. (2017)

What’s in your water? Pathogen landscape analysis of lab-raised Astyanax mexicanus; practical guidelines to increase biosecurity

Powers, A.K., Davis, E.M., Kaplan, S.A. and Gross, J.B. (2017)

Cranial asymmetry arises later in the life history of the blind Mexican cavefish, Astyanax mexicanus

Powers, A.K., Davis, E.M., Kaplan, S.A. and Gross, J.B. (2017)

The evolution of cranial asymmetry across the life history of the blind mexican cavefish

Di Tizio, L., Di Francesco, N., Pennelli, M. and Placentile, G. (2017)

Osservazioni in acquario sulla fenologia del caracide cieco delle grotte Astyanax jordani

Collins, E., Rutkowski, J., Ornelas García, P., Rétaux, S., Rohner, N. and Espinasa, L. (2017)

Divergent evolutionary pathways for aggression and territoriality in Astyanax cave fish

Maldonado, E., García O.M. and Santacruz, A. (2017)

Evodevo and adaptations to perpetually dark environments: The left-right swimming preference in cave and surface morphs from Astyanax mexicanus

Tabin, J., Rohner, N., Haro, A., Kowalko, J., Martineau, B., Borowsky, R. and Tabin, C. (2017)

The evolution of temperature preference in the mexican cave fish Astyanax mexicanus

Fumey, J., Hinaux, H., Noirot, C., Thermes, C., Retaux, S. and Casane, D. (2017)

Evidence for Late Pleistocene origin of Astyanax mexicanus cavefish.

Delić, T., Trontelj, P., Rendoš, M. and Fišer, C. (2017)

The importance of naming cryptic species and the conservation of endemic subterranean amphipods

Pierre, C., Froc, C., Callebert, J. and Rétaux, S. (2017)

Functional and behavioral consequences of the mutation in MAO in the blind cavefish Astyanax mexicanus

Lyon, A., Powers, A.K., Gross, J.B. and O'Quin, K.E. (2017)

Two – three loci control scleral ossicle formation via epistasis in the cavefish Astyanax mexicanus

Bonaroti, N., Rutkowski, J., Rétaux, S., Collins, E., Ornelas García, P., Heintz, C. and Espinasa, L. (2017)

A year in the life of two populations of Astyanax mexicanus.

Gross, J.B. (2017)

Evolution and development of cranial asymmetry in Astyanax cavefish

Riddle, M., Aspiras, A., Tabin, J., Damen, F., Martineu, B., Peavey, M. and Tabin, C. (2017)

It takes guts to live in a cave: Investigating the genetic basis of cave-specific gastrointestinal (gi) and metabolic adaptations

Kaplan, S.A., Powers, A.K. and Gross, J.B. (2017)

Understanding the Origin of Cranial Bone Fragmentation: Live-fluorescent Imaging Across Astyanax mexicanus Development

Espinasa, L., Bonaroti, N., Wong, J., Pottin, K., Queinnec, E. and Retaux, S. (2017)

Contrasting feeding habits of post-larval and adult Astyanax cavefish

Yoshizawa, M., Valdez, C., Yew, J., Coyle, K. and Roberts, R. (2017)

Rapid evolution of the gut symbionts and asd-like behavior in the extreme cave environment

Espinasa, L., Gibbon, D., Rutkowski, J., Collins, E. and Rohner, N. (2017)

Recuperation of vision in a blind cavefish population.

Box, A.C., Peuß, R., Haug, J. and Rohner, N. (2017)

Immunology without antibodies: Studying fish hematopoietic tissue using intrinsic cell signals, image cytometry and advanced analysis methods

Schmitter-Soto, J.J. (2017)

A revision of Astyanax (Characiformes: Characidae) in Central and North America, with the description of nine new species

Jaggard, J.B., Robinson, B.G., Stahl, B, Oh, I., Masek, P., Yoshizawa, M. and Keene, A. (2017)

The lateral line confers evolutionarily derived sleep loss in the Mexican cavefish.

Riddle, M.R.; Tabin, C.J (2017)

The eyeless Mexican cavefish Astyanax mexicanus as a model to investigate development and evolution of the gastrointestinal (GI) tract

Stahl, B.A., Jaggard, J.B., Duboue, E.R. and Keene, A.C. (2017)

The evolution of neural circuitry regulating sleep and arousal in the blind mexican cavefish

Krishnan, J. and Rohner, N. (2017)

Cavefish and the basis for eye loss

Herman, A., Weagley, J., Jeffery, W.R., Borowsky, R., Brandvain, Y., Bilandžija, H., Espinasa, L., O'Quin, K., Ornelas-García, C., Gilbertson, E., Passow, C., Yoshizawa, M., Warren, W. and McGaugh, S.E. (2017)

Population genomics in Astyanax

Alvarado, C.G., Gálvez Hernández, O., Garduño Sánchez, M. and Ornelas García, C.P. (2017)

Parallel evolution of body shape in Astyanax (Characidae) morphotypes

Stahl, B.A. and Gross, J.B. (2017)

A comparative transcriptomic analysis of development in two Astyanax cave populations

Mifsud. N. and Baker, N. (2017)

Poissons mexicains: une fenêtre sur l’évolution.

Peña-Herrejón, Guillermo A. Sanchez-Velazquez, Julieta Cruz-Hernández, Andrez Aguirre-Becerra, Humberto García-Trejo, Fernando (2017)

Breeding system for Astyanax mexicanus

Ornelas-Garcia, C.P., Powers, A., Berning, D., Rodiles, R., Barluenga, M. and Gross, J.B. (2017)

Transcriptome analyses and 3d geometric morphometrics characterization of lacustrine species pairs in Astyanax genus

Jaggard, J.B., Robinson, B.G., Stahl, B.A., Oh, I., Masek, P., Yoshizawa, M. and Keene, A.C. (2017)

The lateral line confers evolutionarily derived sleep loss in the mexican cavefish

Hyacinthe, C., Aattia, J., Froc, C. and Retaux, S. (2017)

Evolution of acoustic communication in the blind cavefish Astyanax mexicanus

Gore, A.V., Tomins, K., Iben, J., Castranova, D., Davis, A., Parkhurst, A., Soueidan, S., Jeffery, W.R. and Weinstein, B.M. (2017)

Role of DNA methylation in cavefish eye specific gene repression

Simon, N., Fujita, S., Porter, M. and Yoshizawa, M. (2017)

Extra-ocular opsin expression of Astyanax mexicanus cave and surface morphs

Jeffery, W.R., Ma, L., Tomins, K., Castranova, D., Weinstein, B.M. and Gore, A. (2017)

Analysis of the eye QTL gene CBSA reveals the role of cranial vasculature in regression of the cavefish visual system

Gore, A.V., Tomins, K.A., Iben, J., Ma, L., Castranova, D., Davis, A.E., Parkhurst, A., Jeffery, W.R. and Weinstein, B.M. (2017)

An epigenetic mechanism for cavefish eye degeneration

Simon, V., Elleboode, R., Mahé,K. Legendre, L., Ornelas‑Garcia, P., Espinasa, L. and Rétaux, S. (2017)

Comparing growth in surface and cave morphs of the species Astyanax mexicanus: insights from scales

Wilkens, H. and Strecker, U. (2017)

Evolution in the dark: Darwin's loss without selection

Torres-Paz, J., Alié, A., Devos, L., Prunier, L., Boulet, F., Blin, M., Elipot, Y. and Rétaux, S. (2017)

Developmental evolution of the prosencephalon in blind cavefish: Origins of natural variations in neuropeptidergic patterning and their behavioral consequences

Gorički, S., Stanković, D., Snoj, A., Kuntner, M., Jeffery, W.R., Trontelj, P., Pavićević, M., Grizelj, Z., Năpăruş-Aljančič, M. and Aljančič, G. (2017)

Environmental DNA in subterranean biology: range extension and taxonomic implications for Proteus

Poulson, T.L (2017)

Book review: Wilkens and Strecker 2017 Evolution in the dark

Chin, J.S.R., Gassant, C.E., Amaral, P.M., Lloyd, E., Stahl, B.A., Jaggard, J.B., Keene, A.C. and Duboue, E.R. (2018)

Convergence on reduced stress behavior in the Mexican blind cavefish

Gore, A., Jeffery, W., Retaux, S. and Rohner, N. (2018)

Cavefish development

Gore, A.V., Rohner, N., Rétaux, S. and Jeffery, W.R. (2018)

Seeing a bright future for a blind fish

Koch, L. (2018)

All eyes on rapid adaptive evolution

Alie, A., Devos, L., Torres-Paz, J., Prunier, L., Boulet, F., Blin, M., Elipot, Y. and Retaux, S. (2018)

Developmental evolution of the forebrain in cavefish, from natural variations in neuropeptides to behavior

Stern, D.B and Crandall, K.A. (2018)

The evolution of gene expression underlying vision loss in cave animals

Ma, L., Strickler, A.G., Parkhurst, A., Yoshizawa, M., Shi, J. and Jeffery, W.R. (2018)

Maternal genetic effects in Astyanax cavefish development

Torres-Dowdall, J., Karagic, N., Plath, M. and Riesch, R. (2018)

Evolution in caves: selection from darkness causes spinal deformities in teleost fishes

Xiong, S., Krishnan, J., Peuß, F. and Rohner, N. (2018)

Early adipogenesis contributes to excess fat accumulation in cave populations of Astyanax mexicanus

Ren, X.Y., Hamilton, N., Müller, F. and Yamamoto, Y. (2018)

Cellular rearrangement of the prechordal plate contributes to eye degeneration in the cavefish

Carlson, B.M., Klingler, I.B., Meyer, B.J. and Gross, J.B. (2018)

Genetic analysis reveals candidate genes for activity QTL in the blind Mexican tetra, Astyanax mexicanus

Elliott, W.R. (2018)

The Astyanax Caves of Mexico: Cavefishes of San Luís Potosí, Tamaulipas, and Guerrero

Devitsina, G.V. and Golovkina, T.V. (2018)

Structural Organization of the Taste Apparatus in Characins (Characidae, Teleostei

Klaassen, H., Wang, Y., Adamski, K., Rohner, N. and Kowalko, J.E. (2018)

CRISPR mutagenesis confirms the role of oca2 in melanin pigmentation in Astyanax mexicanus

Rohner, N. (2018)

“Out of the dark” Cavefish are entering biomedical research

Espinasa, L., Robinson, J. and Espinasa, M. (2018)

Mc1r gene in Astroblepus pholeter and Astyanax mexicanus: Convergent regressive evolution of pigmentation across cavefish species

Porter, M.L. and Sumner‐Rooney, L. (2018)

Evolution in the dark: Unifying our understanding of eye loss

Helena, B., Lindsey, A., Li, M., Kenneth, J.R. and William, R.J. (2018)

Behavioural changes controlled by catecholaminergic systems explain recurrent loss of pigmentation in cavefish

Fumey, J., Hinaux, H., Noirot, C., Thermes, C., Rétaux, S. and Casane, D. (2018)

Evidence for late Pleistocene origin of Astyanax mexicanus cavefish

Gross, J.B., Weagley, J., Stahl, B.A., Ma, L., Espinasa, L. and McGaugh, S.E. (2018)

A local duplication of the Melanocortin receptor 1 locus in Astyanax

Frøland Steindal, I.V., Beale, A.D., Yamamoto, Y. and Whitmore, D. (2018)

Development of the Astyanax mexicanus circadian clock and non-visual light responses

Keene, A.C.and Duboue, E.R. (2018)

The origins and evolution of sleep

Atukorala, A.D.S. and Franz-Odendaal, T.A. (2018)

Genetic linkage between altered tooth and eye development in lens-ablated Astyanax mexicanus

Shiriagin, V. and Korsching, S.I. (2018)

Massive expansion of bitter taste receptors in blind cavefish, Astyanax mexicanus

Stahl, B.A., Sears, C.R., Ma, L., Perkins, M., & Gross, J.B. (2018)

Pmela and Tyrp1b contribute to melanophore variation in Mexican cavefish

Retaux, S. (2018)

The healthy diabetic cavefish conundrum

Blin, M., Tine, E., Meister, L., Elipot, Y., Bibliowicz, J., Espinasa, L. and Rétaux, S. (2018)

Developmental evolution and developmental plasticity of the olfactory epithelium and olfactory skills in Mexican cavefish

Atukorallaya, D.S.A. and Ratnayake, R.K. (2018)

Shaping the craniofacial skeleton of Mexican cavefish (Astyanax mexicanus); Role of Osteoblast and Osteoclast.

Bussotti, S., Di Franco, A., Bianchi, C.N., Chevaldonné, P., Egea, L., Fanelli, E., Lejeusne, C., Musco, L., Navarro-Barranco, C., Pey, A. and Planes, S. (2018)

Fish mitigate trophic depletion in marine cave ecosystems

Ornelas-García, P,. Pajares, S., Sosa-Jiménez, V.M., Rétaux, S. and Miranda-Gamboa, R.A. (2018)

Microbiome differences between riverdwelling and cave-adapted populations of the fish Astyanax mexicanus (De Filippi, 1853)

Sovrano, V.A., Potrich, D., Foà, A. and Bertolucci, C. (2018)

Extra-visual systems in the spatial reorientation of cavefish

Tang, J.L.Y., Guo, Y., Stockdale, W.T., Rana, K., Killen, A.C., Mommersteeg, M.T.M. and Yamamoto, Y. (2018)

The developmental origin of heart size and shape differences in Astyanax mexicanus populations

Powers, A.K., Kaplan, S.A., Boggs, T.E. and Gross, J. (2018)

Facial bone fragmentation in blind cavefish arises through two unusual ossification processes

Zhao, H., Di Mauro, G., Lungu-Mitea, S., Negrini, P., Guarino, A.M., Frigato, E., Braunbeck, T., Ma, H., Lamparter, T., Vallone, D., Bertolucci, C. and Foulkes, N.S. (2018)

Modulation of DNA repair systems in blind cavefish during evolution in constant darkness

Stockdale, W.T., Lemieux, M.E., Killen, A.C., Zhao, J., Hu, J., Riepsaame, J. Hamilton, N., Kudoh, T., Riley, P.R., van Aerle, R., Yamamoto, Y. and Mommersteeg, M.T.M. (2018)

Heart regeneration in the Mexican cavefish

Carlson, B.M. and Gross, J.B. (2018)

Characterization and comparison of activity profiles exhibited by the cave and surface morphotypes of the blind Mexican tetra, Astyanax mexicanus

Sears, C.R. and Gross, J.B. (2018)

The RNA Architecture of Life in the Dark: A Transcriptomic Assessment of Varying Photic Conditions in the Blind Mexican Cavefish, Astyanax mexicanus

Ceinos, R., Frigato, E., Pagano, C., Fröhlich, N., Negrini, P., Cavallari, N., Vallone, D., Fuselli, S., Bertolucci, C. and Foulkes, N. (2018)

Mutations in blind cavefish target the light-regulated circadian clock gene, period 2

Kasumyana, A.O. and Marusova, E.A. (2018)

Odor stimulation and relation to taste stimuli in the blind cave fish Astyanax fasciatus

Espinasa, L. (2018)

The Guerrero fish population: Astyanax aeneus as a comparative cavefish model

Ornelas-García, P., Pajares, S., Sosa-Jiménez, V.M., Rétaux, S. and Miranda-Gamboa, R.A. (2018)

Microbiome differences between river-dwelling and caveadapted populations of the fish Astyanax mexicanus (De Filippi, 1853)

Kasumyan, A.O. and Marusov, E.A. (2018)

[Odor stimulation and relation to taste stimuli in the blind cave fish Astyanax fasciatus]

Espinasa, L., Legendre, L., Fumey, J., Blin, M., Rétaux, S. and Espinasa, M. (2018)

A new cave locality for Astyanax cavefish in Sierra de El Abra, Mexico

Powers, A.K., Boggs, T.E. and Gross, J.B. (2018)

Canal neuromast position prefigures developmental patterning of the suborbital bone series in Astyanax cave- and surface-dwelling fish

Mirande, J.M. (2018)

Morphology, molecules and the phylogeny of Characidae (Teleostei, Characiformes)

Borowsky, R. (2018)

Primer. Cavefishes

Tabin, J.A., Aspiras, A., Martineau, B., Riddle, M., Kowalko, J., Borowsky, R., Rohner, N. and Tabin, C.J. (2018)

Temperature preference of cave and surface populations of Astyanax mexicanus

Bilandzija, H., Abraham, L., Ma, L., Renner, K.J., & Jeffery, W.R. (2018)

Behavioural changes controlled by catecholaminergic systems explain recurrent loss of pigmentation in cavefish

Borowsky, R., Luk, A., He, X.J. and Kim, R.S. (2018)

Unique sperm haplotypes are associated with phenotypically different sperm subpopulations in Astyanax fish

Yoshizawa, M., Settle, A., Hermosura, M.C., Tuttle, L.J., Cetraro, N., Passow, C.N. and McGaugh, S.E. (2018)

The evolution of a series of behavioral traits is associated with autism-risk genes in cavefish

Espinasa, L., Hoese, G., Toulkeridis, T. and Toomey, R. (2018)

Corroboration that the Mc1rGly/Ser mutation correlates with the phenotypic expression of pigmentation in Astroblepus

Davis, V.A., Holbrook, R.I. and Burt de Perera, T. (2018)

The influence of locomotory style on three-dimensional spatial learning

Fernandes, V.F.L., Macaspac, C., Lu, L. and Yoshizawa, M. (2018)

Evolution of the developmental plasticity and a coupling between left mechanosensory neuromasts and an adaptive foraging behavior

Riddle, M.R., Boesmans, W., Caballero, O, Kazwiny, Y. and Tabin,C.J. (2018)

Morphogenesis and motility of the Astyanax mexicanus gastrointestinal tract

Riddle, M.R., Aspiras, A.C., Gaudenz, K., Peuß, R., Sung, J.Y., Martineau, B., Peavey, M., Box, A.C., Tabin, J.A., McGaugh, S., Borowsky, R., Tabin, C.J. and Rohner, N. (2018)

Insulin resistance in cavefish as an adaptation to a nutrient-limited environment

Rohner, N. (2018)

Cavefish as an evolutionary mutant model system for human disease

Herman, A., Brandvain, Y., Weagley, J., Jeffery, W.R., Keene, A.C., Kono, T.J., Bilandžija, H., Borowsky, R., Espinasa, L., O'Quin, K., Ornelas-García, C.P., Yoshizawa, M., Carlson, B, Maldonado E, Gross JB, Cartwright RA, Rohner N, Warren WC, McGaugh SE. (2018)

The role of gene flow in rapid and repeated evolution of cave‐related traits in Mexican tetra, Astyanax mexicanus

Garita-Alvarado, C.A., Barluenga, M. and Ornelas-García, C.P. (2018)

Parallel evolution of morphs of Astyanax species (Teleostei: Characidae) in México and Central America

Riddle, M., Martineau, B., Peavey, M. and Tabin, C. (2018)

Raising the Mexican tetra Astyanax mexicanus for analysis of post-larval phenotypes and whole-mount immunohistochemistry.

Lloyd, E., Olive, C., Stahl, B.A., Jaggarda, J.B., Amaral, P., Dubouéa, E.R and Keene, A.C. (2018)

Evolutionary shift towards lateral line dependent prey capture behavior in the blind Mexican cavefish

Pagano, C., Siauciunaite, R., Idda, M.L., Ruggiero, G., Ceinos, R.M., Pagano, M., Frigato, E., Bertolucci, C., Foulkes, N.S. and Vallone, D. (2018)

Evolution shapes the responsiveness of the D-box enhancer element to light and reactive oxygen species in vertebrates

Pazza, R., Dergam, J.A. and Kavalco, K.F. (2018)

Trends in karyotype evolution in Astyanax (Teleostei, Characiformes, Characidae): Insights from molecular data.

Jaggard, J.B., Stahl, B.A., Lloyd, E., Prober, D.A., Duboue, E.R. and Keene, A.C. (2018)

Hypocretin underlies the evolution of sleep loss in the Mexican cavefish

Kopp, J., Avasthi, S. and Espinasa, L. (2018)

Phylogeographical convergence between Astyanax cavefish and mysid shrimps in the Sierra de El Abra, Mexico

Gore, A.V., Tomins K.A., Iben, J., Ma, L., Castranova, D., Davis, A.E., Parkhurst, A., Jeffery, W.R. and Weinstein, B.M. (2018)

An epigenetic mechanism for cavefish eye degeneration

Kling, J. (2018)

Insulin resistance grows in the dark

Ojha, A. and Watve, M. (2018)

Blind fish: An eye opener

Torres-Paz,J., Hyacinthe, C., Pierre, C., Retaux, S. (2018)

Towards an integrated approach to understand Mexican cavefish evolution

Ahmad, H., Azizan, T.R.P.T., Noor, M.H.M., Hassim, H.A. and Daud, H.M. (2018)

Development of a Y-maze task for studying cognitive function using teleost zebrafish (Danio rerio) and cavefish (Astyanax mexicanus)

Jeffery, W.R. (2018)

Maternal genetic effects in Astyanax cavefish development

McGaugh, S.E., Passow, C.N., Jaggard, J.B., Stahl, B.A. and Keene, A.C. (2019)

Unique transcriptional signatures of sleep loss across independently evolved cavefish populations

Blin, M. and Rétaux, S. (2019)

Voir ou sentir, l’histoire d’Astyanax mexicanus

Keene, A.C. (2019)

Genetic and evolutionary regulation of sleep-feeding interactions

Hu, Z., Lemieux, M. and Mommersteeg, M. (2019)

Differences in extracellular matrix deposition during heart regeneration and scarring in Astyanax mexicanus

Borowsky, R. (2019)

Gene flow from surface to cave populations of Astyanax mexicanus is ongoing

Warren, W.C., Koren, S., Meyer, A. and Rohner, N. (2019)

The next generation of Asytanax mexicanus genome references

McGaugh, S.E., Weaver, S., Gilbertson, E.N., Garrett, B., Rudeen, M.L., Grieb, S., Roberts, J., Donny, A., Marchetto, P. and Gluesenkamp, A.G. (2019)

Evidence for rapid phenotypic and behavioral change in a recently established cavefish population

McGaugh, S.E., Passow, C., Jaggard, J.B., Stahl, B. and Keene, A. (2019)

Sleep deprivation evokes unique expression responses across independently evolved cavefish

Krishnan, J. and Rohner, N. (2019)

Sweet fish: Fish models for the study of hyperglycemia and diabetes

Leclercq, J., Torres-Paz, J. and Rétaux, S. (2019)

Impact of maternal factors during evolution of gastrulation and forebrain morphogenesis in Astyanax mexicanus

Torres-Paz, J., Leclercq, J. and Rétaux, S. (2019)

Maternally regulated gastrulation as a source of variation contributing to cavefish forebrain evolution

Loomis, C., Peuß, R., Jaggard, J., Wang, Y., McKinney, S., Raftopoulos, S., Raftopoulos, A., Whu, D., Green, M., McGaugh, S.E., Rohner, N., Keene, A.C., Duboue, E.R. (2019)

An adult brain atlas reveals broad neuroanatomical changes in independently evolved populations of Mexican cavefish

Legendre, L., Pere, S. and Rétaux, S. (2019)

Water quality of rivers and caves inhabited by Astyanax mexicanus surface fish and cavefish

Fernandes, V.F.L., Hernandez, H., Doeden, N. and Yoshizawa, M. (2019)

Evolution of sensory-behavior laterality in Astyanax mexicanus

Loomis, C., Peuss, R., Jaggard, J.B., Wang, Y., McKinney, S.A., Raftopoulos, S.C., … Duboue, E.R. (2019)

An adult brain atlas reveals broad neuroanatomical changes in independently evolved populations of Mexican cavefish

Luc, H., Sears, C., Raczka, A. and Gross, J.B. (2019)

Wholemount in situ hybridization for Astyanax embryos

Legendre, L., Guillet, B., Leguay, E., Meunier, E., Keck, N. and Sohm, F. (2019)

RESAMA : French network for aquatic model animal health Monitoring. Focus on Astyanax mexicanus

O’Gorman, M., Lewis, P., Keene, A., Kowalko, J. and Duboué, E. (2019)

Adapting zebrafish rearing techniques for Astyanax mexicanus

Atukorallaya, D., Bhatia, V. and Ratnayake, R. (2019)

Tooth and jaw development in health and disease; Insight form Mexican tetra (Astyanax mexicanus)

Wilkens, H (2019)

The primacy of the genotype

Lloyd, E., Olive, C., Stahl, B.A., Jaggard, J.B., Amaral, P., Duboué, E.R. and Keene, A.C. (2019)

Evolutionary shift towards lateral line dependent prey-capture in the Mexican Cavefish

Loomis, C., Peuss, R., Green, M., McGaugh, S.E., Rohner, N., Keene, A.C. and Duboue, E.R. (2019)

Generation of a brain atlas for adult Astyanax reveal differences in distinct neuroanatomical sub-nuclei associated with cave-specific behaviors

Fernandes, C.S., Batalha, M.A., Bichuette, M.E. (2019)

Dark diversity in the dark: a new approach to subterranean conservation

Mogdans, J. (2019)

Sensory ecology of the fish lateral-line system: Morphological and physiological adaptations for the perception of hydrodynamic stimuli

Jeffery, W.R. (2019)

Astyanax mexicanus: A vertebrate model for evolution, adaptation, and development in caves

Devos, L., Klee, F., Edouard, J., Simon, V., Legendre, L., Khallouki, N.E., Barbachou, S., Sohm, F. and Rétaux, S. (2019)

Morphogenetic and patterning defects explain the coloboma phenotype of the eye in the Mexican cavefish

Devos, L., Edouard, J., Simon, V., Agnès, F., Sohm, F. and Rétaux, S. (2019)

Eye morphogenesis in the blind Mexican cavefish

McDole, B., Jaggard, J., Duboue, E. and Keene, A.C. (2019)

Multiphoton ablation of HCRT neurons increases sleep in the Molino cavefish population

Torres-Paz, J., Leclercq. J. and Rétaux, S. (2019)

Evolution of gastrulation and forebrain morphogenesis in Astyanax mexicanus

Jazwinska, A. and Blanchoud, S. (2019)

Towards deciphering variations of heart regeneration in fish

Maximino, C., do Carmo Silva, R.X., dos Santos Campos, K., de Oliveira, J.S., Rocha, S.P., Pyterson, M.P., dos Santos Souza, D.P., Feitosa, L.M., Ikeda, S.R., Pimentel, A.F.N., Pâmila N. F. (2019)

Sensory ecology of ostariophysan alarm substances

Jaggard, J., Lloyd, E., Loomis, C., Cook, C., Vega, P., McGaugh, S., Rohner, N., Bohrner, J., Duboue, E. and Keene, A.C. (2019)

A cavefish brain atlas reveals functional and anatomical evolution of morphology and neural activity with convergence of sleep and feeding circuits

Riddle, M., Damen, F., Aspiras, A., Tabin, J., McGaugh, S. and Tabin, C. (2019)

Investigating the genetic and developmental basis of gut length plasticity in A. mexicanus

Paz, A., McDole, B., Duboue, E. and Keene, A.C. (2019)

Analysis of startle responses in A. mexicanus reveals possible effects of diminished predation

Krishnan, J. and Rohner, N. (2019)

Regulatory evolution of metabolic adaptations in cavefish

Piscor, D., Pozzobon, A.P.B., Fernandes, C.A., Centofante, L, and Parise-Maltempi, P.P. (2019)

Molecular clock as insight to estimate the evolutionary history and times of divergence for 10 nominal Astyanax species (Characiformes, Characidae): An evolutionary approach in species with 2n = 36, 46, 48, and 50 chromosomes

Kowalko, J.E. (2019)

Elucidating the genetic basis of trait evolution in the cavefish

van der Weele, C.M. and Jeffery, W.R. (2019)

Cavefish embryos develop more red blood cells as an adaptation to hypoxia

Phelps, A. and Gross, J. (2019)

Examination of pigmentation differences in cave and surface Astyanax mexicanus using in situ hybridization

Bilandžija, H., Hollifield, B., Steck, M., Meng, G., Ng, M., Bedek, J., Ćetković, H., Porter, M., Renner, K.J. ands Jeffery, W.R. (2019)

Phenotypic plasticity and genetic assimilation in the evolution of cave-adapted traits in Astyanax mexicanus

Sifuentes-Romero I. and Kowalko, J.E. (2019)

Morphological variations in eye size: does rx3 play a role?

Palluzzi, T., Rowland, R. and Gross, J. (2019)

The effect of neuromast position on bone fragmentation in the third suborbital bone of Astyanax mexicanus

Imarazene, B., Herpin, A., Feron, R., Postlethwait, J.H., Schartl, M., Retaux, S. and Guiguen, Y. (2019)

Micro-evolution of sex determination mechanisms and sex determining genes in the cavefish, Astyanax mexicanus

Jeffery, W.R., Ma, L., Shi, J., Ng, M. and Gore,A. (2019)

Evolution of left-right axis asymmetry in Astyanax cavefish

Stahl, B.A., Jaggard, J.B., Chin, J.S., Kowalko, J.E., Keene, A.C. and Duboué, E.R. (2019)

Manipulation of gene function in Mexican cavefish

McNeill-Jewer, C.A., Reinhardt, E.G., Collins, S., Kovacs, S., Chan, W.M., Devos and LeMaillot, F.C. (2019)

The effect of seasonal rainfall on nutrient input and biological productivity in the Yax Chen cave system (Ox Bel Ha), Mexico, and implications for μXRF core studies of paleohydrology

Ornelas-García, C.P., Pajares, S., Sosa-Jiménez, V.M., Rétaux, S. and Gamboa-Miranda, R. (2019)

Microbiome characterization of cave-adapted and surface populations of the fish Astyanax mexicanus (De Filippi, 1853)

Powers, A.K., Garita-Alvarado, C., Rodiles, R., Berning, D.J., Gross, J.B. and Ornelas-García, C.P. (2019)

Cranial plasticity in lake-dwelling Astyanax morphotypes corresponds to feeding preference

Worsham, M., Fernandes, V.F.L., Settle, A., Balaan, C., Lactaoen, K., Tuttle, L.J., Iwashita, M. and Yoshizawa, M. (2019)

Behavioral tracking and neuromast imaging of Mexican cavefish.

Atukorala, A.D.S., Bhatia, V. and Ratnayake, R. (2019)

Craniofacial skeleton of Mexican tetra (Astyanax mexicanus): As a bone disease model

Mogdans, J. (2019)

Sensory ecology of the fish lateral line system: morphological and physiological adaptations for the perception of hydrodynamic stimuli

Xiong, S., Krishnan, J., Peuss, R. and Rohner, N. (2019)

How cavefish adapt to food limited environment?

Peuß, R., Zakibe, Z., Krishnan, J., Merryman, M.S., Baumann, D.P. and Rohner, N. (2019)

Gamete collection and In vitro fertilization of Astyanax mexicanus

Potts, H.G., Stockdale, W.T., Choudhury, R.P. and Mommersteeg, M.T.M. (2019)

Investigating the role of CD11b/ITGAM, a leukocyte adhesion protein, in cardiac regeneration

Keene, A.C. and Appelbaum, L. (2019)

Sleep in fish models

Pierre, C., Torres-Paz, J., Froc, C., Callebert, J. and Rétaux, S. (2019)

Functional and behavioral consequences of the mutation in monoamine oxidase (MAO) in the blind cavefish Astyanax mexicanus

Gil-Galvez, A., de la Calle Mustienes, E., Neto, A.., Bilandžija, H., Jeffery, W.R., Gómez-Skarmeta, J.L. (2019)

The role of Cis-Regulatory elements in morphological adaptation to cave environment in Astyanax mexicanus

Borowsky, R., Luk, A. and Kim, R.S. (2019)

Sperm swimming behaviors are correlated with sperm haploid genetic variability in the Mexican tetra, Astyanax mexicanus

Gallman, K., Rivera, D. and Soares, D. (2019)

Evolutionary increases in catecholamine signaling may underlie the emergence of adaptive traits and behaviors in the blind cavefish, Astyanax mexicanus

Powers, A.K., Boggs, T.E., Kaplan, S.A., Davis, E.M. and Gross, J.B. (2019)

Sensory-skeletal integration and cranial asymmetry in cavefish

Sears, C.R. (2019)

Transcriptomic analysis of the effect of dark-rearing on Astyanax mexicanus

Emam, A., Yoffe, M., Cardona, H. and Soares, D. (2019)

Retinal morphology in Astyanax mexicanus during degeneration

Hyacinthe, C., Attia, J. and Retaux, S. (2019)

Evolution of acoustic communication in the blind cavefish Astyanax mexicanus

Reyes Corral, W.D. and Aguirre, W.E. (2019)

Effects of temperature and water turbulence on vertebral number and body shape in Astyanax mexicanus (Teleostei: Characidae)

Culver, D.C. and Pipan, T. (2019)

The biology of caves and other subterranean habitats. Second edition.

Stockdale, W.T., Tang, J.L.Y., Hu, Z., Potts, H.G., Lemieux, M.E., Yamamoto, Y. and Mommersteeg, M.T.M. (2019)

Heart development and regeneration in Astyanax mexicanus

Rétaux, S., Bibliowicz, Y., Blin, M., Elipot, Y., Espinasa, L., Hinaux, H. and Tine, E. (2019)

Olfactory capacities in blind cavefish

Berning, D., Adams, H., Luc, H. and Gross, J.B. (2019)

In-frame indel mutations in the genome of the blind Mexican cavefish, Astyanax mexicanus

Yoffe, M., Patel, K., Palia, E., Kolawole, S., Streets, A., Haspel, G. and Soares, D. (2019)

Hunting strategies and the lateral line of Astyanax mexicanus larva

Policarpo, M., Fumey, J., Lafargeas, P., Legendre, L., Naquin, D., Thermes, C., Møller, P.R., Bernatchez, L., García-Machado, E., Rétaux, S. and Casane, D. (2019)

Molecular decay of light-processing genes in cavefishes: assessing the effects of time, genome architecture and gene flow

Worsham, M., Fang, J. and Yoshizawa, M. (2019)

Epigenetic regulation of phenotype of Mexican tetras

Stahl, B.A., Peuß, R., McDole, B., Kenzior, A., Jaggard, J.B., Gaudenz, K., Krishnan, J., McGaugh, S.E., Duboue, E.R., Keene, A.C. and Rohner, N. (2019)

Stable transgenesis in Astyanax mexicanus using the Tol2 transposase system

Betancur-R.R., Arcila, D., Vari, R.P. et al. (2019)

Phylogenomic incongruence, hypothesis testing, and taxonomic sampling: the monophyly of characiform fishes

Hyacinthe, C., Attia, J. and Retaux, S. (2019)

Evolution of acoustic communication in blind cavefish

Agnès, F., Devos, L. and Rétaux, S. (2019)

The embryonic eyefield of the cavefish Astyanax mexicanus

Ma, L. and Jeffery, W.R. (2019)

Global analysis of maternal transcripts in Astyanax cavefish eggs

Kasumyan, A.O. and Vinogradskaya, M.I. (2019)

Palatability of bile substances for fish

Shimobayashi, M., Shetty, S., Frei, I.C., Wölnerhanssen, B.K., Weissenberger, D., Dietz, N., Thomas, A., Ritz, D., Meyer-Gerspach, A.C., Maier, T., Hay, N., Peterli, R., Rohner, N. (2019)

Diet-induced loss of adipose Hexokinase 2 triggers hyperglycemia

Simon, V., Hyacinthe, C. and Retaux, S. (2019)

Breeding behavior in the blind Mexican cavefish and its river‐dwelling conspecific

Fernández, A.A., Evans, E.I. and Baumann, D.P. (2019)

The importance of health monitoring in Astyanax mexicanus

Duboue, E. (2019)

Evolution of stress responses in Mexican cavefish

Pastana, M.N.L., Bockmann, F.A. and Datovo, A. (2019)

The cephalic lateral-line system of Characiformes (Teleostei: Ostariophysi): anatomy and phylogenetic implications

Riddle, M.R., Aspiras, A., Damen, F., Hutchinson, J.N., Chinnapen, D. and Tabin, C.J. (2019)

Genetic architecture underlying changes in carotenoid accumulation during the evolution of the Blind Mexican cavefish, Astyanax mexicanus

Pennisi, E. (2019)

A lopsided face helps this eyeless cave fish navigate

Blin, M., Fumey, J., Père, S., Pierre, C., Torres-Paz, J., Simon, V., Espinasa, L. Legendre, L., Casane, D. and Rétaux, S. (2019)

Olfactory behavior of different wild Astyanax mexicanus populations

Bilandžija, H., Hollifield, B., Steck, M., Meng, G., Ng, M., Koch, A.D., Gračan, R., Ćetković, H., Porter, M.L., Renner, K.J. and Jeffery, W.R. (2019)

Phenotypic plasticity as a mechanism of cave colonization and adaptation

Jaggard, J.B., Lloyd, E., Lopatto, A., Duboue, E.R. and Keene, A.C. (2019)

Automated measurements of sleep and locomotor activity in Mexican cavefish.

Garduño-Sánchez, M.A.A. and Ornelas-García, C.P. (2019)

Molecular evolution of rhodopsin gene in Astyanax mexicanus (De Filippi, 1853)

Boggs, T.E. and Gross, J.B. (2019)

Exploring the role of blood physiology in cave adaptation

Peuß, R., Box, A.C., Wang, Y., Chen, S., Krishnan, J., Tsuchiya, D., Peak, A., Perera, A., Slaughter, B. and Rohner, N. (2019)

Cave adaptation shifts immune cell composition compensating increased inflammatory responses in Astyanax mexicanus

Kibele, C.S., Montgomery, J.C. and Radford, C.A. (2019)

The use of evoked potentials to determine sensory sub‑modality contributions to acoustic and hydrodynamic sensing

Riddle, M.R. and Tabin, C.J. (2019)

Little fish, big questions: A collection of modern techniques for Mexican tetra research

Mcgaugh, S.E., Weaver, S., Gilbertson, E.N., Garrett, B., Rudeen, M.I., Grieb, S., Roberts, J., Donny, A., Marchetto, P. and Gluesenkamp, A,G. (2019)

Evidence for rapid phenotypic and behavioural shifts in a recently established cavefish population

Yoshizawa, M., Valdez, C., Balaan, C., Lactaoen, K., Kato, J., Ito, M., Yew, J. and Iwashita, M. (2019)

Reciprocal social Interaction was recovered under the treatment of ketogenic diet

Coppola, J. and Espinasa, L. (2019)

Cave Astyanax: Hunters or scavengers? Evidence from gut contents

Hernández, J., Garita-Alvarado, C.A. and Ornelas-García, C.P. (2019)

Parallel trophic morphology in cave and surface fish Astyanax mexicanus (De Filippi 1853)

van der Laan, R. (2019)

Freshwater fish list. An alphabetic scientific name list of the world's freshwater fishes and an overview of the scientific names used in the aquarium literature

Espinasa, L., Retaux, S., Yoshisawa, M., Heintz, C. and Balogh-Robinson, R. (2019)

Vibration Attraction Behavior expression is prevalent among caves, but variable within caves

Van der Weele, C.M. and Jeffery, W.R. (2019)

Cavefish increase red blood cell development and reprogram metabolism as adaptations to environmental hypoxia.

Stahl, B.A., Peuß, R., McDole, B., Kenzior, A., Jaggard, J.B., Gaudenz, K., Krishnan, J., McGaugh, S.E., Duboue, E.R., Keene, A.C and Rohner, N. (2019)

Stable transgenesis in Astyanax mexicanus using the Tol2 transposase system

Stahl, B.A., Peuß, R., McDole, B., Kenzior, A., Jaggard, J.B., Gaudenz, K., Krishnan, J., McGaugh, S.E., Duboue, E.R., Keene, A.C. and Rohner, N. (2019)

Stable transgenesis in Astyanax mexicanus using the Tol2 transposase system

Gluesenkamp, A. and McGaugh, S. (2019)

The Texas Tetra Project

Barash, D.P. (2019)

Review of: Wilkens and Strecker (2017) Evolution in the Dark: Darwin’s Loss Without Selection

Stockdale, W.T., Deal, O., Heintz, C., Rohner, N., and Mommersteeg, M.T.M. (2019)

Glucose metabolism during heart regeneration in the Astyanax mexicanus

Simon, N., Fujita, S., Porter, M. and Yoshizawa, M. (2019)

Expression of extraocular opsin genes and light-dependent basal activity of blind cavefish

Kling, J. (2019)

To wild depths for new models

Kindl, G.H. and O’Quin, K.E. (2019)

On intra- and inter-specific variation in teleost scleral ossification

Gore, A., Swearer, A., Iben, J. and Weinstein, B. (2019)

Cavefish: a model to study subcutaneous fat deposition

Chin, J.S.R., Loomis, C.L., Phan, T.A.N., Albert, L.T., Chang, L.P., Keene, A.C. and Duboué, E.R. (2019)

Diminished stress responses in the Mexican blind cavefish

Pierre, C. (2020)

Conséquences fonctionnelles, comportementales et adaptatives d’une mutation de la MAO (MonoAmine Oxydase) chez le poisson cavernicole aveugle Astyanax mexicanus

McGaugh, S.E., Passow, C.N., Jaggard, J.B., Stahl, B.A. and Keene, A.C. (2020)

Unique transcriptional signatures of sleep loss across independently evolved cavefish populations.

Jeffery, W.R. (2020)

Astyanax surface and cave fish morphs

Leclercq, J., Pierre, C., Simon, V. and Blin, M. (2020)

La génétique évolutive du tétra mexicain Astyanax mexicanus

Terán, G.E., Benitez, M.F. and Mirande, J.M. (2020)

Opening the Trojan horse: phylogeny of Astyanax, two new genera and resurrection of Psalidodon (Teleostei: Characidae)

Jaggard, J.B., Lloyd, E., Yuiska, A., Patch, A., Fily, Y., Kowalko, J.E., Appelbaum, L., Duboue, E.R. and Keene, A.C. (2020)

Cavefish brain atlases reveal functional and anatomical convergence across independently evolved populations

Krishnan, J., Persons, J.L., Peuß, R., Hassan, H., Kenzior, A., Xiong, S., Olsen, L., Maldonado, E., Kowalko, J.E. and Rohner, N. (2020)

Comparative transcriptome analysis of wild and lab populations of Astyanax mexicanus uncovers differential effects of environment and morphotype on gene expression

Ornelas, P., Gonzalez, E.G., Tautz, D. and Doadrio, I. (2020)

Lack of genetic differentiation between two sympatric species of Astyanax (Characidae:Teleostei) in Lake Catemaco, Mexico

Ma, L., Ng, M., van der Weele, C.M., Yoshizawa, M. and Jeffery, W.R. (2020)

Dual roles of the retinal pigment epithelium and lens in cavefish eye degeneration

Gallman, K., Fortune, E., Rivera, D. and Soares, D. (2020)

Differences in behavior between surface and cave Astyanax mexicanus may be mediated by changes in catecholamine signaling

Riddle, M.R., Aspiras, A.C., Gaudenz, K., Peuß, R., Sung, J.Y., Martineau, B., Peavey, M., Box, A.C., Tabin, J.A., McGaugh, S., Borowsky, R., Tabin, C.J. and Rohner, N. (2020)

Author Correction: Insulin resistance in cavefish as an adaptation to a nutrient-limited environment

Minchin, J.E.N. (2020)

Adaptation of blind cavefish to nutrient poor environments: uncovering diverse new mechanisms that regulate body fat levels

Powers, A.K., Berning, D.J. and Gross, J.B. (2020)

Parallel evolution of regressive and constructive craniofacial traits across distinct populations of Astyanax mexicanus cavefish.

Gross, J.B. and Powers, A.K. (2020)

A natural animal model system of craniofacial anomalies: The blind Mexican cavefish

Sears, C.R., Boggs, T.E. and Gross, J.B. (2020)

Dark‐rearing uncovers novel gene expression patterns in an obligate cave‐dwelling fish

Bilandžija H., Hollifield B., Steck M., Meng G., Ng M., Koch A. D, Gračan, R., Ćetković, H., Porter, M.L., Renner, K.J. and Jeffery, W. (2020)

Phenotypic plasticity as a mechanism of cave colonization and adaptation

Gimhani, N. and Atukorallaya, D. (2020)

Influence of the eye on neurocranium development; Insights from Mexican cavefish (Astyanax mexicanus)

Maldonado, E., Rangel‐Huerta, E., Rodriguez‐Salazar, E., Pereida‐Jaramillo, E. and Martínez‐Torres, A. (2020)

Subterranean life: Behavior, metabolic, and some other adaptations of Astyanax cavefish

Powers, A.K., Boggs, T.E.and Gross, J.B. (2020)

An asymmetric genetic signal associated with mechanosensory expansion in cave-adapted fish

Warren, W.C., Boggs, T.E., Borowsky, R., Carlson, B.M., Ferrufino, E., Gross, J.B., Hillier, L., Hu, Z., Keene, A.C., Kenzior, A., et al. (2020)

A chromosome level genome of Astyanax mexicanus surface fish for comparing population-specific genetic differences contributing to trait evolution

Yoffe, M., Patel, K., Palia, E., Kolawole, S., Streets, A. Haspel, G. and Soares, D. (2020)

Morphological malleability of the lateral line allows for surface fish (Astyanax mexicanus) adaptation to cave environments

Cao, J. and Cheng, X. (2020)

Molecular evolution and characterization of fish stathmin genes

Torres-Paz, J. and Rétaux, S. (2020)

Embryological manipulation to probe early evo-devo in the fish Astyanax mexicanus

Espinasa, L., Ornelas-García, C.P., Legendre, L., Rétaux, S., Best, A., Gamboa-Miranda, R., Espinosa-Pérez, H. and Sprouse, P. (2020)

Two new localities of Astyanax cavefish plus revision of its biogeography

McGaugh, S.E., Kowalko, J., Duboue, E.R., Lewis, P., Franz-Odendaal, T.A., Rohner, N., Gross, J.B. and Keene, A.C. (2020)

Dark world rises: The emergence of cavefish as a model for the study of evolution, development, behavior, and disease

Pierre, C., Pradère, N., Froc, C., Ornelas-García, P., Callebert, J. and Rétaux. S. (2020)

A mutation in monoamine oxidase (MAO) affects the evolution of stress behavior in the blind cavefish Astyanax mexicanus

Rohner, N. (2020)

In the spotlight—Early career researcher

Wilkens, H. (2020)

The role of selection in the evolution of blindness in cave fish

Kowalko, J.E., Franz‐Odendaal, T.A. and Rohner, N. (2020)

Introduction to the special issue—cavefish—adaptation to the dark

Sifuentes‐Romero, I., Ferrufino, E., Thakur, S., Laboissonniere, L.A., Solomon, M., Smith, C.L., Keene, A.C., Trimarchi, J.M. and Kowalko, J.E. (2020)

Repeated evolution of eye loss in Mexican cavefish: Evidence of similar developmental mechanisms in independently evolved populations

Kowalko, J.E., Franz-Odendaal, T.A. and Rohner, N. (2020)

Cavefish special issue

Ma, L., Ng, M., Shi, J., Gore, A.V., Castranova, D., Weinstein, B.M. and Jeffery, W.R. (2020)

Evolutionary changes in left-right visceral asymmetry in Astyanax cavefish

Mercado-Silva, N., Ornelas-Garcia, C.P., Schmitter-Soto, J.J., Gidmark, N.J. and Simons, A.M. (2020)

Characidae: Characins

Peuss, R., Box, A.C., Chen S., Wang Y., Tsuchiya D., Persons J. L., . . . and Rohner N. (2020)

Adaptation to low parasite abundance affects immune investment and immunopathological responses of cavefish

Patch, A., Paz, A., Holt, K., Duboue, E., Kowalko, J., Keene, A. and Fily, Y. (2020)

Analysis of social swimming dynamics in the Mexican cavefish

Paz, A., McDole, B., Kowalko, J.E., Duboue, E.R. and Keene, A.C. (2020)

Evolution of the acoustic startle response of Mexican cavefish

Riddle, M.R., Aspiras, A.C., Damen, F., Hutchinson, J.N., Chinnapen, D.J.F., Tabin, J. and Tabin, C.J. (2020)

Genetic architecture underlying changes in carotenoid accumulation during the evolution of the blind Mexican cavefish, Astyanax mexicanus

Krishnan, J., Seidel, C.W., Zhang, N., Van Campen, J., Peuß, R., Xiong, S., Kenzior, A., Li, H., Conaway, J.W. and Rohner, N. (2020)

Genome-wide analysis of cis-regulatory changes in the metabolic 1 adaptation of cavefish

Warren, M.L. and Burr, B.M. (2020)

Freshwater fishes of North America. Volume 2 Characidae to Poeciliidae

Chin, J.S.R., Loomis, C.L., Albert, L.T., Medina‐Trenche, S., Kowalko, J., Keene, A.C. and Duboué, E.R. (2020)

Analysis of stress responses in Astyanax larvae reveals heterogeneity among different populations

Chin, J.S.R., Loomis, C.L., Albert, L.T., Medina-Trenche, S., Kowalko, J., Keene, A.C. and Duboué, E.R. (2020)

Analysis of stress responses in Astyanax larvae reveals heterogeneity among different populations

Mack, K.L., Jaggard, J.B., Persons, J.L., Passow, C.N., Stanhope, B.A., Ferrufino, E., Tsuchiya, D., Smith, S.E., Slaughter, B.D., Kowalko, J., Rohner, N., Keene, A.C. and McGaugh, S.E. (2020)

Repeated evolution of circadian clock dysregulation in cavefish populations

Franz-Odendaal, T.A. (2020)

In the spotlight—Established researcher

Riddle, M.R., Damen, F., Aspiras, A., Tabin, J.A., McGaugh, S. and Tabin, C.J. (2020)

Evolution of gastrointestinal tract morphology and plasticity in cave-adapted Mexican tetra, Astyanax mexicanus

Kowalko, J.E. (2020)

In the spotlight—Early career researcher

Pierre, C., Pradère, N., Froc, C., Ornelas-García, P., Callebert, J. and Rétaux, S. (2020)

A mutation in monoamine oxidase (MAO) affects the evolution of stress behavior in the blind cavefish Astyanax mexicanus

Ingalls, A., Merryman, S., Baumann, D.P. (2020)

Length-mass relationship and aggression of Astyanax mexicanus (Mexican cavefish) reared in a laboratory environment

Marandel, L., Plagnes-Juan, E., Marchand, M., Callet, T., Dias, K., Terrier, F., Père, S., Vernier, L., Panserat, S. and Rétaux, S. (2020)

Nutritional regulation of glucose metabolism-related genes in the emerging teleost model mexican tetra surface fish: a first exploration

Ingalls, A., Merryman, S., Baumann, D.P. (2020)

Non-invasive measurement of cortisol in Astyanax mexicanus (Mexican tetra) as it relates to environmental stressors

Medley, J.K., Persons, J., Peuß, R., Olsen, L., Xiong, S. and Rohner, N. (2020)

Untargeted metabolomics of the cavefish Astyanax mexicanus reveals the basis of metabolic strategies in adaptation to extreme conditions

Espinasa, L., Ornelas-García, C.P., Legendre, L., Rétaux, S., Best, A., Gamboa-Miranda, R., Espinosa-Pérez, H. and Sprouse, P. (2020)

Discovery of two new Astyanax cavefish localities leads to further understanding of the species biogeography

Emam, A., Yoffe, M., Cardona, H. and Soares, D. (2020)

Retinal morphology in Astyanax mexicanus during eye degeneration

Policarpo, M., Fumey, J., Lafargeas, P., Naquin, D., Thermes, C., Naville, M., Dechaud, C., Volff, J.-M., Cabau, C., Klopp, C., Rask Møller, P., Bernatchez, L., García-Machado, E., Rétaux, S. and Casane, D. (2020)

Contrasted gene decay in subterranean vertebrates: insights from cavefishes and fossorial mammals

Phelps, A.N., Luc, H.M. and Gross, J.B. (2020)

Comparative developmental expression of neural crest genes in the blind Mexican cavefish, Astyanax mexicanus

Kowalko, J. (2020)

Utilizing the blind cavefish Astyanax mexicanus to understand the genetic basis of behavioral evolution

Peuß, R., Box, A.C., Chen, S., Wang, Y., Tsuchiya, D., Persons, J.L., Kenzior, A., Maldonado, E., Krishnan, J., Scharsack, J.P., Slaughter, B.D. and Rohner, N. (2020)

Adaptation to low parasite abundance affects immune investment and immunopathological responses of cavefish.

Contrasted gene decay in subterranean vertebrates: insights from cavefishes and fossorial mammals

Ma, L., Gore, A.V., Castranova, D., Shi, J., Ng, M., Tomins, K.A., van der Weele, C.M., Weinstein, B.M. and Jeffery, W.R. (2020)

A hypomorphic cystathionine ß-synthase gene contributes to cavefish eye loss by disrupting optic vasculature

Blin, M., Fumey, J., Lejeune, C., Policarpo, M., JLeclercq, J., Père, S., Torres-Paz, J., Pierre, C., Imarazene, B. and Rétaux, S. (2020)

Diversity of olfactory responses and skills in Astyanax mexicanus cavefish populations inhabiting different caves

Cutlip, C. (2020)

Gene found that causes eyes to wither in cavefish

Jandzik, D. and Stock, D.W. (2020)

Differences in developmental potential predict the contrasting patterns of dental diversification in characiform and cypriniform fishes

Devos, L., Agnès, F., Edouard, J., Simon, V., Legendre, L., El Khallouki, N., Barbachou S., Sohm, F. and Rétaux, S. (2021)

Eye morphogenesis in the blind Mexican cavefish

Jandzik, D. and Stock, D.W. (2021)

Differences in developmental potential predict the contrasting patterns of dental diversification in characiform and cypriniform fishes

Potts, H.G., Stockdale,W.T. and Mommersteeg, M.T.M. (2021)

Unlocking the secrets of the regenerating fish heart: Comparing regenerative models to shed light on successful regeneration.

Espinasa, L., Heintz, C., Rétaux, S., Yoshisawa, M., Agnès, F., Ornelas-Garcia, P. and Balogh-Robinson, R. (2021)

Vibration Attraction Response (VAB) is a plastic trait in Blind Mexican tetra (Astyanax mexicanus), variable within subpopulations inhabiting the same cave

Torres-Paz, J. and Retaux, S. (2021)

Pescoids and chimeras to probe early evo-devo in the fish Astyanax mexicanus

Mack, K.L., Jaggard, J.B., Persons, J.L., Roback, E.Y., Passow, C.N., Stanhope, B.A., Ferrufino, E., Tsuchiya, D. Smith, S.E., Slaughter, B.D. et al. (2021)

Repeated evolution of circadian clock dysregulation in cavefish populations

Pérez-Rodríguez, R., Esquivel-Bobadilla, S., Orozco-Ruíz, A.M., Olivas-Hernández, Jé.L. and García-De León, F.J. (2021)

Genetic structure and historical and contemporary gene flow of Astyanax mexicanus in the Gulf of Mexico slope: a microsatellite-based analysis

Warren, W.C., Boggs, T.E., Borowsky, R., Carlson, B.M., Ferrufino, E., Gross, J.B., Hillier, L., Hu, Z., Keene, A.C., Kenzior, A. and Kenzior, A. and Kowalko, J.E. (2021)

A chromosome-level genome of Astyanax mexicanus surface fish for comparing population-specific genetic differences contributing to trait evolution

Gimhani, N. and Atukorallaya, D. (2021)

Comparative analysis of the parasphenoid bone development in Mexican tetra (Astyanax mexicanus)

Torres-Paz, J. and Rétaux, S. (2021)

Pescoids and chimeras to probe early evo-devo in the fish Astyanax mexicanus

A supernumerary ‘‘B-sex’’ chromosome drives male sex determination in the Pachon cavefish, Astyanax mexicanus

Ma, L., Ng, M., Shi, J., Gore, A.V., Castranova, D., Weinstein, B.M. and Jeffery, W.R. (2021)

Maternal control of visceral asymmetry evolution in Astyanax cavefish

Ma, L., Dessiatoun, R., Shi, J. and Jeffery, W.R. (2021)

Incremental temperature changes for maximal breeding and spawning in Astyanax mexicanus.

Riddle, M.R., Aspiras, A., Damen, F., McGaugh, S., Tabin, J.A. and Tabin, C.J. (2021)

Genetic mapping of metabolic traits in the blind Mexican cavefish reveals sex‑dependent quantitative trait loci associated with cave adaptation

O'Gorman, M., Thakur, S., Imrie, G., Moran, R.L., Choy, S., Sifuentes-Romero, I., Bilandžija, H., Renner, K.J., Duboué, E., Rohner, N., McGaugh, S.E., Keene, A.C. and Kowalko, J.E. (2021)

Pleiotropic function of the oca2 gene underlies the evolution of sleep loss and albinism in cavefish

Wilkens, H. (2021)

Variability and the primacy of the genotype

Kistner, A.R., Enriquez, M.S., Michels, N.O. and Mensinger, A.F. (2021)

Behavioral differences in sound detection in recently diverged cave and surface forms of Astyanax mexicanus

Garita-Alvarado, C.A., Garduño-Sánchez, M., Barluenga, M. and Ornelas-García, C.P. (2021)

Genetic and ecomorphological divergence between sympatric Astyanax morphs from Central America

Iwashita, M. and Yoshizawa, M. (2021)

Social-like responses are inducible in asocial Mexican cavefish despite the exhibition of strong repetitive behavior

Tanvir, Z., Rivera, D., Severi, K.E., Haspel, G. and Soares, D. (2021)

Evolutionary and homeostatic changes in morphology of visual dendrites of Mauthner cells in Astyanax blind cavefish.

Wilson, E.J., Tobler, M., Riesch, R., Martínez‑García, L. and García‑De León, F.J. (2021)

Natural history and trophic ecology of three populations of the Mexican cavefish, Astyanax mexicanus

Krishnan, J., Seidel, C.W., Zhang, N., VanCampen, J., Peuss, R., Xiong, S., Kenzior, A., Li, H., Conaway, J.W. and Rohner, N. (2021)

RNA-Seq Analysis of liver cells of Astyanax mexicanus

Olsen, L., Thum, E. and Rohner, N. (2021)

Lipid metabolism in adaptation to extreme nutritional challenges

Imarazene, B., Beille, S., Jouanno, E., Branthonne, A., Thermes, V., Thomas, M., Herpin, A., Rétaux, S. and Guiguen, Y. (2021)

Primordial germ cell migration and histological and molecular characterization of gonadal differentiation in Pachón cavefish Astyanax mexicanus.

Broadfoot, M.V. (2021)

Stowers Institute amasses menagerie of unconventional organisms to study health and disease

Oliva, C., Hinz, N.K., Robinson, W., Barrett Thompson, A.M., Booth, J., Crisostomo, L.M., Zanineli, S., Tanner, M., Lloyd, E., O’Gorman, M., McDole, B., Paz, A., Kozol, R. et al. (2021)

Characterizing the genetic basis of trait evolution in the Mexican cavefish

Moran, R.L., Jaggard, J.B., Roback, E.Y., Rohner, N., Kowalko, J.E., Ornelas-García, C.P., McGaugh, S.E. and Keene, A.C. (2021)

Hybridization underlies localized trait evolution in cavefish

Devos, L., Agnès, F., Edouard, J., Simon, V., Legendre, L., El Khallouki, N., Barbachou, S., Sohm, F. and Rétaux, S. (2021)

Eye morphogenesis in the blind Mexican cavefish

Boggs, T. and Gross, J. (2021)

Reduced oxygen as an environmental pressure in the evolution of the blind Mexican cavefish

Xiong, S., Wang, W., Kenzior, A., Olsen, L., Krishnan, J., Persons, J., Medley, K., Peuß, R., Wang, Y., Chen, S., Zhang, N., Thomas, N., Miles, J.M., Sánchez Alvarado, A. and Rohner, N. (2021)

Enhanced lipogenesis through Pparγ helps cavefish adapt to food scarcity

Agnès, F., Torres-Paz, J., Michel, P. and Rétaux, S. (2021)

A 3D molecular map of the cavefish neural plate illuminates eyefield organization and its borders in vertebrates

Iwashita, M. and Yoshizawa, M. (2021)

Social-like responses are inducible in asocial Mexican cavefish despite the exhibition of strong repetitive behaviour

Zhao, H., Li, H., Du, J., Di Mauro, G., Lungu-Mitea, S., Geyer, N., Vallone, D., Bertolucci, C. and Foulkes, N.S. (2021)

Regulation of ddb2 expression in blind cavefish and zebrafish reveals plasticity in the control of sunlight-induced DNA damage repair

Eschmeyer, W.N. and Van der Laan, R. and Fricke, R. (2021)

Eschmeyer's Catalog of Fishes: Genera, Species, References

Borowsky, R. (2021)

Evolution: The genetics of trait evolution in cavefish

Policarpo, M., Laurenti, P., García-Machado, E., Metcalfe, C., Rétaux, S. and Casane, D. (2021)

Genomic evidence that blind cavefishes are not wrecks of ancient life

Garita-Alvarado, C.A., Garduño-Sánchez, M., Barluenga, M. and Ornelas-García, C.P. (2021)

Genetic and ecomorphological divergence between sympatric Astyanax morphs from Central America

Reyes Pérez, R.I. (2022)

Evolutionary development of skull morphology in the cavefish Astyanax mexicanus

Lunsford, E.T., Paz, A., Keene, A.C. and Liao, J.C. (2022)

Evolutionary convergence of a neural mechanism in the cavefish lateral line system

Sumbre, G. (2022)

Principles of functional circuit connectivity: Insights from the zebrafish optic tectum

Porfiri, M., Zhang, P. and Peterson, S.D. (2022)

Hydrodynamic model of fish orientation in a channel flow

Stanton, D., Justin, H.S. and Reitzel, A.M. (2022)

Step in time: Conservation of circadian clock genes in animal evolution

Silva. P., Zavareh, P.A. and Atukorala, D. (2022)

Teleost fish as model animals to understand alcohol teratology

Thakur, S., Tuyet Tra, N. and Cummings, M. (2022)

Understanding coping styles in a fish species with alternative reproductive tactics

Kemeny, R. (2022)

Blind Mexican cave fish are developing cave-specific accents. The Mexican tetra has evolved to live in a number of dark caves – and now we know that the fish in each cave use clicks to communicate in distinct ways

Smith, D.G. and Bowman, I.A. (2022)

The long journey of Curt Kosswig

Lunsford, E.T., Paz, A., Keene, A.C. and Liao, J.C. (2022)

Evolutionary convergence of a neural mechanism in the cavefish lateral line system

Pierre, C., Callebert, J., Launay, J.M. and Rétaux, S. (2022)

The enzymatic and neurochemical outcomes of a mutation in Mexican cavefish MAO reveal teleost-specific aspects of brain monoamine homeostasis

Hendrickson, D. (2022)

Not yet known

Lesser, E. (2022)

Cavefish focus on which way the water flows

Borowsky, R. and Chen, H. (2022)

Mutagenesis alters sperm swimming velocity in Astyanax

Powers, A.K., Hyacinthe, C., Riddle, M., Kim, Y.K., Amaismeier, A., Thiel, K., Martineau, B., Ferrante, E., Moran, R., McGaugh, S., Boggs, T., Gross, J.B. and Tabin, C.J. (2022)

Genetic mapping of craniofacial traits in the Mexican tetra reveals loci associated with bite differences between cave and surface fish

Fernandes, V.F.L., Espinasa, L., Glaser, Y., Iwashita, M., Sadowski, P. and Yoshizawa, M. (2022)

Diversity of the left-right asymmetry evolution in the sensory system and the behavior output of Astyanax mexicanus

Krishnan, J., Seidel, C.W., Zhang, N., Singh, N.P., VanCampen, J., Peuß, R., Xiong, S., Kenzior, A., Li, H., Conaway. J.W. and Rohner, N. (2022)

Genome-wide analysis of cis-regulatory changes underlying metabolic adaptation of cavefish

Rétaux, S. (2022)

La boîte à outils de l’évolution développementale ou comment les poissons cavernicoles mexicains ont perdu leurs yeux

Leclercq, J. (2022)

Evolution of the eye in Astyanax mexicanus : contribution of maternal and early developmental regulations

Riddle, M., Guerra, D.P., Aspiras, A., Chinnapen, D., Damen, F., Hutchinson, J.N., McGaugh, S., Tabin, J. and Tabin, C. (2022)

Evolution of provitamin A assimilation in Astyanax mexicanus

Martik, M. (2022)

Reactivation of the embryonic neural crest gene program during zebrafish cardiac regeneration

Medley, J.K., Persons, J., Biswas, T., Olsen, L., Peuß, R., Krishnan, J., Xiong, S. and Rohner, N. (2022)

The metabolome of Mexican cavefish shows a convergent signature highlighting sugar, antioxidant, and ageing-related metabolites

Lloyd, E., McDole, B., Privat, M., Jaggard, J.B., Duboue, E.R., Sumbre, G. and Keene, A.C. (2022)

Blind cavefish retain functional connectivity in the tectum despite loss of retinal input

Garduno-Sanchez, M., Hernandez-Lozano, J., Moran, R., Miranda-Gamboa, R., Gross, J., Rohner, N., Elliott, W.R., Miller, J., Lozano-Vilano, L., McGaugh, S. and Ornelas-Garcia, C. (2022)

Phylogeographic relationships and morphological evolution between cave and surface Astyanax mexicanus populations (De Fillipi 1853) (Actinopterygii, Characidae)

Agnès, F., Torres-Paz, J., Michel, P. and Rétaux, S. (2022)

A 3D molecular map of the cavefish neural plate illuminates eye-field organization and its borders in vertebrates

Krishnan, J., Seidel, C.W., Zhang, N., Singh, N.P., Van Campen, J., Peuß, R., Xiong, S., Kenzior, A., Li, H., Conaway, J.W. and Rohner, N. (2022)

Genome-wide analysis of cis-regulatory changes underlying metabolic adaptation of cavefish

Kozol, R.A., Conith, A.J., Yuiska, A., Cree-Newman, A., Tolentino, B., Banesh, K., Paz, A., Lloyd, E., Kowalko, J.E., Keene, A.C., Albertson, R.C. and Duboue, E.R. (2022)

Global and discrete mechanisms of evolution have transformed the shape and volume of cavefish brain regions

Krishnan, J., Wang, Y., Kenzior, O., Hassan, H., Olsen, L., Tsuchiya, D., Kenzior, A., Peuß, R., Xiong, S., Wang, Y., Zhao, C. and Rohner, N. (2022)

Liver-derived cell lines from cavefish Astyanax mexicanus as an in vitro model for studying metabolic adaptation

Bhatia, V., de Jesus, V.C., Shaik, F.A., Jaggupilli, A., Singh, N., Chelikani, P. and Atukorallaya, D. (2022)

Extraoral expression and characterization of bitter taste receptors in Astyanax mexicanus (Mexican tetra fish)

Leclercq, J., Torres-Paz, J. and Rétaux, S. (2022)

Evolution of gene expression regulation in blind cavefish embryos

Lloyd, E., McDole, B., Privat, M., Jaggard, J.B., Duboué, E., Sumbre, G. and Keene, A. (2022)

Blind cavefish retain functional connectivity in the tectum despite loss of retinal input

Rodríguez-Ballesteros, V., Mendoza-Garfias, B., Ulloa-Arvizu, R., Balcazar, A. and Ornelas-García, C.P. (2022)

Morphological description of gametes in cave and surface populations of Astyanax mexicanus (De Filippi, 1853)

Rodriguez-Morales, R., Gonzalez-Lerma, P., Yuiska, A., Heon Han, J., Guerra, Y., Crisostomo, L., Keene, A.C., Duboue, E.R. and Kowalko, J. (2022)

Convergence on reduced aggression through shared behavioral traits in multiple populations of Astyanax mexicanus

Fernandes, V.F.L., Glaser, Y., Iwashita, M. and Yoshizawa, M. (2022)

Evolution of left–right asymmetry in the sensory system and foraging behavior during adaptation to food‑sparse cave environments

Powers, A., Berning, D., Boggs, T., Hamm, A. and Gross, J. (2022)

Towards an understanding of the developmental and genetic attributes of cranial variation in Astyanax cavefish

Goes, C.A.G., dos Santos, R.Z., Aguiar, W.R.C., Alves, D.C.V., Silva, D.M.Z.dA., Foresti, F., Oliveira, C., Utsunomia, R. and Porto-Foresti, F. (2022)

Revealing the satellite DNA history in Psalidodon and Astyanax Characid fish by comparative satellitomics

Xiong, S., Wang, W., Kenzior, A., Olsen, L., Krishnan, J., Persons, J., Medley, K., Peuß, R., Wang, Y., Chen S., Zhang, N., Thomas, N., Miles, J.M., Sanchez Alvarado A. and Rohner, N. (2022)

Enhanced lipogenesis through Ppary helps cavefish adapt to food scarcity

Berning, D. and Gross, J.B. (2022)

Developmental timing and genetic architecture of external taste expansion in the Mexican tetra, Astyanax mexicanus

Powers, A.K and Tabin, C. (2022)

The genetic basis underlying jaw size differences in cavefish

Espinasa, L., Collins, E., Ornelas García, C.P., Rétaux, S., Rohner, N. and Rutkowski, J. (2022)

Divergent evolutionary pathways for aggression and territoriality in Astyanax cavefish

Potts, H.G., Lemieux, M.E., Rice, E.S., Warren,W., Choudhury, R.P. and Mommersteeg, M.T.M. (2022)

Discordant genome assemblies drastically alter the interpretation of single-cell RNA sequencing data which can be mitigated by a novel integration method

Legendre, L., Rode, J., Germon, I., Pavie, M., Quiviger, C., Policarpo, M., Leclercq, J., Père, S., Fumey, J., Hyacinthe, C., Ornelas-García, P., Espinasa, L., Rétaux, S. and Casane, D. (2022)

Genetic identification and reiterated captures suggests that the Astyanax mexicanus El Pachón cavefish population is closed and declining

Jeffery, W.R. Ma, L., Ng, M., Shi, J. and Gore, A.V. (2022)

Control of visceral asymmetry in Astyanax development: Sonic Hedgehog and the left-right organizer

Agnes, F., Torres-Paz, J., Michel, P. and Rétaux, S. (2022)

A 3D molecular map of the cavefish neural plate illuminates eyefield organization and its borders in vertebrates

Maderspacher, F. (2022)

White, fat and blind — Economy and evolution in caves

Choy, S., Polyakov, E., Thakur, S., Lloyd, E., Keene, A. and Kowalko, J. (2022)

Uncovering the role of oca2 in the evolution of prey capture in cavefish

Lunghi, E. and Bilandžija, H. (2022)

Average telomere length in cave vs surface Astyanax mexicanus

Espinasa, L. and Diamant, R. (2022)

Laterality in foraging behavior, reproductive seasonality, and other results from several multi-year, longitudinal studies in the field

Perry, A., McGaugh, S.E., Keene, A.C. and Blackmon, H. (2022)

CaveCrawler: an interactive analysis suite for cavefish bioinformatics

Hutton, P., Rodríguez-Morales, R., Ferrufino, E., Lloyd, E., Dubuoé, E.R., Kowalko, J.E. and Keene, A.C. (2022)

Preliminary data from a functional screen reveals multiple sleep-regulating genes in A. mexicanus

Moran, R.L., Jaggard, J.B., Roback, E.Y., Kenzior, A., Rohner, N., Kowalko, J.E., Ornelas-García, C.P., McGaugh, S.E. and Keene, A.C. (2022)

Hybridization underlies localized trait evolution in cavefish

Wilson, E.J., Tobler, M., Riesch, R., Martínez-García, L. and García-De León, F.J. (2022)

Natural diet of three populations of the Mexican cavefish, Astyanax mexicanus

Shafer, M.E.R., Sawh, A.N. and Schier, A.F. (2022)

Gene family evolution underlies cell-type diversification in the hypothalamus of teleosts

Espinasa, L., Rohner, N. and Rétaux, S. (2022)

Reproductive seasonality of Astyanax mexicanus cavefish

Hyacinthe, C. and Tabin, C. (2022)

Evolution of temperature preference in Astyanax mexicanus

Santacruz, A., Hernández-Mena, D., Miranda-Gamboa, R.A., Pérez-Ponce de León, G. and Ornelas-Garcíai, P. (2022)

Host-parasite interactions after niche change: the macroparasite diversity in the Mexican cavefish Astyanax mexicanus

Rodriguez-Santiago, M., Jordan, A. and Hofmann, H.A. (2022)

Neural activity patterns differ between learning contexts in a social fish

Schartl, M. (2022)

Sex determination in the Pachón cavefish, Astyanax mexicanus, by B-chromosomes

Tanvir, Z., Rivera, D., Severi, K.E., Haspel, G. and Soares, D. (2022)

Evolutionary and homeostatic changes in morphology of visual dendrites of Mauthner cells in Astyanax blind cavefish

Boggs, T.E., Friedman, J.S. and Gross, J.B. (2022)

Alterations to cavefish red blood cells provide evidence of adaptation to reduced subterranean oxygen

Patch, A., Paz, A., Holt, K.J., Duboué, E.R., Keene, A.C., Kowalko, J.E. and Fily, Y. (2022)

Kinematic analysis of social interactions deconstructs the evolved loss of schooling behavior in cavefish

Rice, E. Warren, W.C., Carroll, R., Keene, A. and Rohner, N. (2022)

The evolution of structural change along a surface to cavefish genome trajectory

Leclercq, J., Torres-Paz, J., Policarpo, M., Agnès, F. and Rétaux, S. (2022)

Evolution of the regulation of developmental gene expression in blind Mexican cavefish

Perry, A. McGaugh, S.E., Keene, A.C. and Blackmon, H. (2022)

CaveCrawler: An interactive analysis suite for cavefish bioinformatics

Krishnan, J., Wang, Y., Kenzior, O., Huzaifa, H., Olsen, L., Tsuchiya, D., Wang, Y., Zhao, C. and Rohner, N. (2022)

Liver-derived cell lines from cavefish Astyanax mexicanus as an in vitro model for studying metabolic adaptation

Jeffery, W. (2022)

Environmental hypoxia is a driver of Sonic Hedgehog-dependent troglomorphic evolution in Astyanax cavefish

Biswas, T., Paulson, A., Hall, K, and Rohner, N. (2022)

Fish(ing) in the Hi(gh)-C(sea)

Baumann, D.P. and Ingalls, A. (2022)

Mexican tetra (Astyanax mexicanus): biology, husbandry, and experimental protocols

Baratti, G., Potrich, D., Lee, S.A., Morandi-Raikova, A. and Sovrano, V.A. (2022)

The geometric world of fishes: A synthesis on spatial reorientation in Teleosts

Páscoa, I., Fonseca, E., Ferraz, R., Machado, A.M., Conrado, F., Ruivo, R., Cunha, I. and Castro, L.F.C. (2022)

The preservation of PPARg genome duplicates in some Teleost tineages: Insights into lipid metabolism and xenobiotic exploitation

Bronner, M. (2022)

Not yet known

van der Weele C.M. and Jeffery, W.R. (2022)

Cavefish cope with environmental hypoxia by developing more erythrocytes and overexpression of hypoxia-inducible genes

Perry, A., McGaugh, S.E., Keene, A.C. and Blackmon, H. (2022)

CaveCrawler

Moran, R.L., Jaggard, J.B., Roback, E.Y., Kenzior, A., Rohner, N., Kowalko, J.E., Ornelas-García, C.P., McGaugh, S.E. and Keene, A.C. (2022)

Hybridization underlies localized trait evolution in cavefish

Iwashita, M., Tran, A., Wong, M., Lee, R. and Yoshizawa, M. (2022)

Metabolic shift toward ketosis in asocial cavefish increases social-like collective behavior

Retaux, S., Attia, J., Blin, M., Casane, D., Espinasa, L., Hyacinthe, C., Imarazene, B., Leclercq, J., Legendre, L., Père, S., Pierre, C., Policarpo, M., Torres-Paz, J., and Simon, V. (2022)

Ten years of cavefish field studies: what have we learned?

Agnès, F., Torres-Paz, J., Michel, O. and Rétaux, S. (2022)

A 3D molecular map of the cavefish neural plate illuminates eye-field organization and its borders in vertebrates

Boggs, T. and Gross, J.B. (2022)

Evidence of adaptation to hypoxic subterranean waters in Astyanax mexicanus.

Nwosu, U. (2022)

Regulation of activity patterns in Astyanax mexicanus cavefifish

Rodriguez-Morales, R., Gonzalez-Lerma, P., Yuiska, A., Heon Han, J., Guerra, Y., Crisostomo, L., Keene, A.C., Duboue, E.R. and Kowalko, J.E. (2022)

Convergence on reduced aggression through shared behavioral traits in multiple populations of Astyanax mexicanus

van der Weele, C. and Jeffery, W.R. (2022)

Cavefish develop more erythrocytes and overexpress hypoxia Inducible genes as a response to hypoxic environments

Pennington, A. (2022)

Bioinformatics analyses of new genes of focus in the research of autism with dogs, fats, and a variety of other model organisms

Oliva, C., Hinz, N.K., Robinson, W., Barrett Thompson, A.M., Booth, J., Crisostomo, L.M., Zanineli, S., Tanner, M., Lloyd, E., O’Gorman, M., McDole, B., Paz, A., Kozol, R. et al. (2022)

Characterizing the genetic basis of trait evolution in the Mexican cavefish

Olsen, L., Gluesenkamp, A., Mager, E., Coughlin, D. and Rohner, N. (2022)

Metabolic reprogramming underlies cavefish muscular endurance despite selective loss of muscle mass and contractility

Duboue, E.R., Kowalko, J.E. and Keene, A.C. (2022)

Course‐based undergraduate research experiences (CURES) as a pathway to diversify science

Kuhn, J., Azari, S. and Volkoff, H. (2022)

Effects of temperature on food intake and the expression of appetite regulators in three Characidae fish: The black-skirted tetra (Gymnocorymbus ternetzi), neon tetra (Paracheirodon innesi) and Mexican cavefish (Astyanax mexicanus)

Yoshizawa, M., Balmilero-Unciano, R., Valdez, C., Lactaoen, K., Kato, J., Ito, M., Clarke, K. and Iwashita, M. (2022)

Plasticity in the expression of social affinity under the environmental interventions: spatial and dietary

Enriquez, M.S. (2022)

Investigating rapid divergence of sensory systems between satellite populations of the Mexican tetra (Astyanax mexicanus)

Callier, V. (2022)

Blind Cave Fish May Trade Color for Energy. Pasty cave fish seem to repurpose a melanin-making molecule to better survive famine

Vogt, G. (2022)

Epigenetics and phenotypic plasticity in animals

Paz, A., Holt, K., Duboué, E., Fily, Y. and Kowalko, J. (2022)

The developmental trajectory of social behavior in the Mexican cavefish

Lesku, J.A. and Rattenborg, N.C. (2022)

The missing cost of ecological sleep loss

Roberts, R.J.B., Pop, S. and Prieto-Godino, L.L. (2022)

Evolution of central neural circuits: state of the art and perspectives

Rodríguez-Morales, R., Gonzalez, P., Guerra, Y., Crisostomo, L., Pileggi, B., Kimmel, A. and Kowalko, J. (2022)

Evolution of aggressive behaviors in the blind Mexican cavefish

Berning, D. (2022)

Developmental timing and genetic architecture of external taste expansion in the blind Mexican cavefish, Astyanax mexicanus

Soares, D. (2022)

Evolutionary insights and constraints from the nervous systems and behavior of cavefish

Leal, F. and Tabin, C.J. (2022)

Genetic basis of metabolic specializations in the Mexican cavefish

Hyacinthe, C., Attia, J., Schutz, E., Casane, D. and Rétaux, S. (2022)

Acoustic signatures in cavefish populations inhabiting different caves

Gross, J.B., and Powers, A.K. (2022)

Reinterpreting the work of Charles Breder: Sensory neuromasts and orbital skeleton variation in eyeless Astyanax cavefish

Lloyd, E., Chouuk, B., Conith, A., Albertson, R.C. and Keene, A.C. (2022)

Investigating the evolution and developmental plasticity of sleep and activity patterns in Lake Malawi cichlids

Kozol, R.V., Conith, A.J., Yuiska, A., Cree-Newman, A., Tolentino, B., Banesh, K., Paz, A., Lloyd, E., Kowalko, J.E., Keene, A.C., R. Albertson, C. and Duboue, E.R. (2022)

A brain-wide anatomical analysis suggests structural coevolution of distinct neuroanatomical modules

Espinasa, L., Diamant, R., Mesquita, M., Lindquist, J.M., Powers, A.M. and Helmreich, J. (2022)

Laterality in cavefish: Left or right foraging behavior in Astyanax mexicanus

Lunsford, E.T. (2022)

Mechanisms and evolution of sensory feedback and signal transduction in lateral line hair cells

Fily, Y., Patch, A., Paz, A., Holt, K.J., Duboué, E.R., Keene, A.C. and Kowalko, J.E. (2022)

Evolution of schooling and exploration strategies in the Mexican tetra fish

Tobler, M. (2022)

Extreme environments, natural complexity, and the predictability of evolution

Olsen, L., Levy, M., Medley, J.K., Hassan, H., Alexander, R., Wilcock, E., Yi, K., Florens, L., McKinney, S., Peuß, R., Persons, J., Kenzior, A., Maldonado, E., Gluesenkamp, A. et al. (2022)

Metabolic reprogramming underlies cavefish muscular endurance despite loss of muscle mass and contractility

Mogdans, J. (2022)

The processing of hydrodynamic stimuli with the fish lateral line system

Legendre, L., Espinasa, L., Lacaille-Múzquiz, J.-L., Alaniz-Garfia, G., Ornelas-García, P. and Rétaux, S. (2023)

First record of a freshwater cave sponge (Porifera, unknown gen. and sp.) in a cave inhabited by Astyanax cavefish in the Sierra de El Abra, San Luis Potosí, Mexico

Sifuentes-Romero, I., Aviles, A.M., Carter, J.L., Chan-Pong, A., Clarke, A., Crotty, P., Engstrom, D., Meka, P., Perez, A., Perez, R., Phelan, C., Sharrard, T., Smirnova, M.I.,Wade, A.J. and Kowalko, J.E. (2023)

Trait loss in evolution: What cavefish have taught us about mechanisms underlying eye regression

Frøland Steindal, A., Yamamoto, Y. and Whitmore, D. (2023)

Blind fish have cells that see light

Espinasa, L., Diamant, R., Vinepinsky, E. and Espinasa, M. (2023)

Evolutionary modifications of Astyanax larval prey capture (LPC) in a dark environment

Miranda-Gamboa, R., Espinasa, L., Verde-Ramírez, M.A., Hernández-Lozano, J., Lacaille, J.L., Espinasa, M., Ornelas-García, C.P. (2023)

A new cave population of Astyanax mexicanus from Northern Sierra de El Abra, Tamaulipas, Mexico

Perera, P.P., Guerra, D.P. and Riddle, M.R. (2023)

The Mexican Tetra, Astyanax mexicanus, as a model system in cell and developmental biology

Olsen, L., Hassan, H., Keaton, S. and Rohner, N. (2023)

The Mexican cavefish mount a rapid and sustained regenerative response following skeletal muscle injury

Di Lorenzo, T., Avramov, M., Galassi, D.M.P., Iepure, S., Mammola, S., Reboleira, A.S.P.S and Hervant, F. (2023)

Chapter 20. Physiological tolerance and ecotoxicological constraints of groundwater fauna

Pavlova, V.V. and Krylov, V.V. (2023)

Cavefishes in chronobiological research: A narrative review.

Stowers Institute (2023)

Stowers scientists use cavefish to learn about metabolism and the evolutionary basis of being a couch potato

Santacruz, A., Hernández-Mena, D., Miranda-Gamboa, R., Pérez-Ponce De León, G. and Ornelas-García, P. (2023)

Host-parasite interactions in perpetual darkness: Macroparasite diversity in the cavefish Astyanax mexicanus

Casane, D., Saclier, N., Policarpo, M., François, C. and Lefébure, T. (2023)

Chapter 17. Evolutionary genomics and transcriptomics in groundwater animals

Policarpo, M., Legendre, L., Germon, I., Lafargeas, P., Espinasa, L., Rétaux, S. and Casane, D. (2023)

The nature and distribution of non-functional alleles suggest only two independent events at the origins of Astyanax mexicanus cavefish populations.

Borowsky, R.L. (2023)

Selection maintains the phenotypic divergence of cave and surface fish

Jiménez, A.G., Nash-Braun, E. and Meyers, J.R. (2023)

White epaxial muscle aerobic and anaerobic potential and muscle fiber structure in surface and cave morphotypes of the Mexican cavefish (Astyanax mexicanus)

Garduño-Sánchez, M.A.A., de Jesus-Bonilla, V., Perea, S., Miranda-Gamboa, R., Herrera- García, A., de la Maza Benignos, M. and Ornelas-García, C.P. (2023)

Mitochondrial phylogeography and molecular evolution of the rhodopsin visual pigment in troglobitic populations of Astyanax mexicanus (De Filippi, 1853)

Kozol, R.A., Yuiska, A., Han, J.H., Tolentino, B., Lopatto, A., Lewis, P., Paz, A., Keene, A.C., Kowalko, J.E. and Duboue, E.R. (2023)

Novel husbandry practices result in rapid rates of growth and sexual maturation without impacting adult behavior in the blind Mexican cavefish

Batista da Silva, I., Barbosa, D.A., Kavalco, K.F., Nunes, L.R., Pasa, R. and Menegidio, F.B. (2023)

Discovery of putative long non‑coding RNAs expressed in the eyes of Astyanax mexicanus (Actinopterygii: Characidae)

Legendre, L., Rode, J., Germon, I., Pavie, M., Quiviger, C., Policarpo, M., Leclercq, J., Père, S., Fumey, J. Hyacinthe, C. et al. (2023)

Genetic identification and reiterated captures suggest that the Astyanax mexicanus El Pachón cavefish population is closed and declining

Lakhiani, R., Shanavas, S. and Melnattur, K. (2023)

Comparative biology of sleep in diverse animals

Gil Galvez, A. (2023)

The role of Cis-Regulatory elements during evolution at different evolutionary time points

Baumann, D.P. and Ingalls, A. (2023)

Cryopreservation of the Mexican Tetra Astyanax mexicanus

Castillo-Casas, J.M., Caño-Carrillo, S., Sánchez-Fernández, C., Franco, D. and Lozano-Velasco, E. (2023)

Comparative analysis of heart regeneration: Searching for the key to heal the heart—Part I: Experimental injury models to study cardiac regeneration

Blin, M., Rétaux, S. and Torres-Paz, J. (2023)

Whole-mount multicolor fluorescent labeling by In situ hybridization in Astyanax mexicanus embryos and larvae

Hyacinthe, C., Attia, J., Schutz, E., Lego, L., Casane, D. and Retaux, S. (2023)

Acoustic signatures in Mexican cavefish populations inhabiting different caves

Sifuentes-Romero, I., Ferrufino, E. and Kowalko, J.E. (2023)

Application of CRISPR-Cas9 for functional analysis in A. mexicanus

Weinberger, M. and Riley, P.R. (2023)

Animal models to study cardiac regeneration

Lloyd, E., Kozol, R.A., Duboue, E.R. and Keene, A.C. (2023)

Immunohistochemistry and in vivo neural imaging in A. mexicanus

Gross, J.B., Berning, D., Phelps, A. and Luc, H. (2023)

An analysis of lateralized neural crest marker expression across development in the Mexican tetra, Astyanax mexicanus

Wilkens, H. (2023)

The general significance of variability in cave regressive traits for evolution

Hutton, P., Lloyd, E., Dotson, M. and Keene, A.C. (2023)

Sleep behavior analysis in Astyanax mexicanus

Atukorallaya, D., Bhatia, V. and Gonzales, J. (2023)

Divergent tooth development mechanisms of Mexican tetra fish (Astyanax mexicanus) of Pachon cave origin

Strand, S.H. (2023)

The impact of temperature on developmental morphology and LR Asymmetry in Astyanax mexicanus

Powers, A.K., Hyacinthe, C., Riddle, M.R., Kim, Y.K., Amaismeier, A., Thiel, K., Martineau, B., Ferrante, E., Moran, R.L., McGaugh, S.E., Boggs, T.E., Gross, J.B. and Tabin, C.J. (2023)

Genetic mapping of craniofacial traits in the Mexican tetra reveals loci associated with bite differences between cave and surface fish

Iwashita, M. and Yoshizawa, M. (2023)

A new method to analyze nonvisual-based social-like interactions in asocial cave fish

Olsen, L., Krishnan, J., Banks, C., Hassan, H. and Rohner, N. (2023)

Circadian rhythm disruption linked to skeletal muscle dysfunction in the Mexican Cavefish

Yang, Y., Xu, T., Conant, G., Kishino, H., Thorne, J.L and Ji, X. (2023)

Interlocus gene conversion, Natural Selection, and Paralog Homogenization

Olsen, L., Alexander, R., Krishnan, J. and Rohner, N. (2023)

A generalist’s guide to quantifying swimming behavior within traditional and nontraditional teleost models

Gross, J.B., Boggs, T.E., Rétaux, S. and Torres-Paz, J. (2023)

Chapter 15. Developmental and genetic basis of troglomorphic traits in the teleost fish Astyanax mexicanus

Riddle, M., Nguyen, N., Nave, M., Peuß, R., Maldonado, E., Rohner, N. and Tabin, C. (2023)

Genetic adaptation shapes gut microbiome composition in Astyanax mexicanus

Hyacinthe, C. (2023)

Recording acoustic behavior in Astyanax mexicanus fish: Acquisition, decryption, and interpretation

Enriquez ,M.S., Swanson, N., Putland, R.L., Tait, T., Gluesenkamp, A.G., McGaugh, S.E. and Mensinger, A.F. (2023)

Evidence for rapid divergence of sensory systems between Texas populations of the Mexican tetra (Astyanax mexicanus)

Espinasa, L. and Lewis, K.A. (2023)

Eye convergence is evoked during larval prey capture (LPC) without visual stimulus and in blind cavefish

Rajendran, N., Deng, F., Wang, Y., Kenzior, O., Krishnan, J., Biswas, T., Parmely, T., Rohner, N., Zhao, C. (2023)

Establishment, long-term maintenance, and characterization of primary liver cells from Astyanax mexicanus

Espinasa, L. and Pech, A. (2023)

Biogeographical affinities of the aquatic community of Refugio Cave, a newly discovered Astyanax cave

Garduño-Sánchez, M., Hernández-Lozano, J., Moran, R.L., Miranda-Gamboa, R., Gross, J.B., Rohner, N., Elliott, W.R., Miller, J., Lozano-Vilano, L., McGaugh, S.E. and Ornelas-García, C.P. (2023)

Phylogeographic relationships and morphological evolution between cave and surface Astyanax mexicanus populations (De Filippi 1853) (Actinopterygii, Characidae)

Lloyd, E., Privat, M., Sumbre, G., Duboue, E.R. and Keene, A.C. (2023)

A protocol for whole-brain Ca2+ imaging in Astyanax mexicanus, a model of comparative evolution

Zhang, J.H., Long, R., Jing, Y.Y., Zhang, P., Xu, Y., Xiong, W., Zhu, Y.Q. and Luo, Y.P. (2023)

Loss of behavioral stress response in blind cavefish reduces energy expenditure

Bucher, L. and Gross, J. (2023)

Mexican cavefish living in hypoxic environments exhibit changes in expression of oxygen-transporters

Lomheim, H.J., Rodas, L.R., Mulla, L., Freeborn, L., Sun, D.A., Sanders, S.A. and Protas, M.E. (2023)

Transcriptomic analysis of cave, surface, and hybrid samples of the isopod Asellus aquaticus and identification of chromosomal location of candidate genes for cave phenotype evolution

Culver, D.C., Kowalko, J.E. and Pipan, T. (2023)

Natural selection versus neutral mutation in the evolution of subterranean life: A false dichotomy?

Jiménez, A.G., Nash-Braun, E. and Meyers, J.R. (2023)

Chronic thermal acclimation effects on critical thermal maxima (CTmax) and oxidative stress differences in white epaxial muscle between surface and cave morphotypes of the Mexican cavefish (Astyanax mexicanus)

Berning, D. and Gross, J.B. (2023)

The constructive evolution of taste in Astyanax cavefish: A review.

Yang, X., Song, Y., Zhang, R., Yu, M., Guo, X., Guo, H., Du, X., Sun, S., Li, C., Mao, X., Fan, G. and Liu, X. (2023)

Unraveling the genomic features, phylogeny and genetic basis of tooth ontogenesis in Characiformes through analysis of four genomes

Gross, J.B. and Powers, A.K. (2023)

Reinterpreting the work of Charles Breder: Sensory neuromasts and orbital skeleton variation in eyeless Astyanax cavefish

Olsen, L., Krishnan, J., Banks, C., Hassan, H. and Rohner, N. (2023)

Circadian rhythm disruption is associated with skeletal muscle dysfunction within the blind Mexican cavefish

Kuball, K., Fernandes, V.F.L, Takagi, D. and Yoshizawa, M. (2023)

Blind cavefish evolved food-searching behavior without changing sensory modality compared with sighted conspecies in the dark

Blin, M., Valay, L., Kuratko, M., Pavie, M. and Rétaux, S. (2023)

Evolution of olfactory sensitivity, preferences and behavioral responses in Mexican cavefish: fish personality matters

Cardozo, M.J., Sánchez-Bustamante, E. and Bovolenta, P. (2023)

Optic cup morphogenesis across species and related inborn human eye defects

Arcila, D., Rincon-Sandoval, M., Hanson, W., Hart, P.B., González, V.L., Betancur-R, R. and Bichuette, M.E. (2023)

Transcriptomic analysis of the Brazilian blind characid, Stygichthys typhlops, reveals convergent selection with Astyanax mexicanus and other cavefishes

Iwashita, M., Tran, A., Garcia, M., Cashon, J., Burbano, D., Salgado, V., Hasegawa, M., Balmilero‑Unciano, R., Politan, K., Wong, M., Lee, R.W.Y. and Yoshizawa, M. (2023)

Metabolic shift toward ketosis in asocial cavefish increases social‑like affinity

Olsen, L. plus 17 others (2023)

Metabolic reprogramming underlies cavefish muscular endurance despite loss of muscle mass and contractility

Biswas, T., Rajendran, N., Hassan, H., Zhao, C. and Rohner, N. (2023)

3D spheroid culturing of Astyanax mexicanus liver-derived cell lines recapitulates distinct transcriptomic and metabolic states of in vivo tissue environment

Alunni, A., Pierre, C., Torres-Paz, J., Clairet, N., Langlumé, A., Pavie, M., Escoffier-Pirouelle, T., Leblanc, M., Blin, M. and Rétaux, S. (2023)

An Astyanax mexicanus mao knockout line uncovers the developmental roles of monoamine homeostasis in fish brain

Moran, R.L., Richards, E.J., Ornelas-García, C.P., Gross, J.B., Donny, A., Wiese, J., Keene, A.C., Kowalko, J.E., Rohner, N. and McGaugh, S.E. (2023)

Selection-driven trait loss in independently evolved cavefish populations

Espinasa, L., Pavie, M. and Rétaux, S. (2023)

Protocol for lens removal in embryonic fish and its application on the developmental effects of eye regression

Staeger, S. (2023)

Investigating neuroanatomical evolution through proliferative cells in the Astyanax mexicanus

Boyle, M.J., Arledge, S., Thomas, B., Tomkins, J.P. and Guliuzza, R.J. (2023)

Testing the cavefish model: An organism-focused theory of biological design

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Starvation resistant cavefish reveal conserved mechanisms of starvation induced hepatic lipotoxicity

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Quantitative trait loci concentrate in specific regions of the Mexican cavefish genome and reveal key candidate genes for cave-associated evolution

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Unraveling stress resilience: Insights from adaptations to extreme environments by Astyanax mexicanus cavefish

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The spatiotemporal and genetic architecture of extraoral taste buds in Astyanax cavefish

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Telencephalic eversion in embryos and early larvae of four teleost species

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Conditions for establishing fin primary cell cultures in a wide range of ray‑finned fishes

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Metabolic rates of groundwater species as a function of body mass and temperature

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Potential role of microRNAs in regulating transcriptional profile, and sculpting development and metabolism in cavefish

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Dataset for “Metabolic rates of groundwater species as a function of body mass and temperature”

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3D spheroid culturing of Astyanax mexicanus liver-derived cell lines recapitulates distinct transcriptomic and metabolic states of in vivo tissue environment.

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From darkness to discovery: evolutionary, adaptive, and translational genetic insights from cavefish

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Population size and spatial distribution of the Mexican blind cavefish (Astyanax) within the caves

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Defining the unseen: Population-specific markers for Astyanax mexicanus blind cavefish

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The evolution of olfactory sensitivity, preferences, and behavioral responses in Mexican cavefish is influenced by fish personality.

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Telomere length and dynamics in Astyanax mexicanus cave and surface morphs

Juan, T. and Ebnicher, G. (2024)

In preprints: Shh signaling activity predicts cardiac laterality in Astyanax mexicanus populations

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Sensing in the dark: Constructive evolution of the lateral line system in blind populations of Astyanax mexicanus

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Evolution of fish brains and behaviors: how many ways to generate the same outcomes?

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Blind cavefish evolved higher foraging responses to chemo- and mechanostimuli

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Investigating dentition development and replacement in Mexican tetra two subforms

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Cavefish dorsoventral axis angle during wall swimming: laterality asymmetry

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Vision and the lateral line: Comparative behavioral studies of fish schooling

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Sporadic feeding regulates robust food entrainable circadian clocks in blind cavefish

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Adaptation to hypoxia in the blind Mexican cavefish, Astyanax mexicanus

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Gill morphology adapted to oxygen‐limited caves in Astyanax mexicanus

Alkafaween, E., Hassanat, A., Essa, E. and Elmougy, S. (2024)

CSGA: A dual population Genetic Algorithm based on Mexican Cavefish genetic diversity

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Parallel phenotypic evolution of two independent cavefish lineages of Astyanax mexicanus (De Filippi, 1854) (Characiformes: Characidae)

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Extraordinary model systems for regeneration

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Evolved loss of sleep and circadian rhythms in cavefish

Subterranean Fishes of the World

An account of the subterranean (hypogean) fishes with a bibliography from 1436.

Journal Article