Journal Article

Chromosomal Mapping of Repetitive DNA Sequences in Five Species of Astyanax (Characiformes, Characidae) Reveals Independent Location of U1 and U2 snRNA Sites and Association of U1 snRNA and 5S rDNA

Silva, D. M. Z. A., Utsunomia, R., Pansonato-Alves, J.C., Oliveira, C. and Foresti, F.

Record Number:
3789
Year:
2015
Journal:
Cytogenetic and Genome Research
Pages:
144-152
Volume:
146
Abstract:
Astyanax is a genus of Characidae fishes currently composed of 155 valid species. Previous cytogenetic studies revealed high chromosomal diversification among them, and several studies have been performed using traditional cytogenetic techniques to investigate karyotypes and chromosomal locations of 18S and 5S rDNA genes. However, only a few studies are currently available about other repetitive sequences. Here, the chromosomal location of small nuclear RNA genes, identified as U1 and U2 snRNA clusters, was established and compared to the distribution of 5S rDNA and histone clusters in 5 Astyanax species (A. paranae, A. fasciatus, A. bockmanni, A. altiparanae, and A. jordani) using FISH. The cytogenetic mapping of U1 and U2 snRNA demonstrated a conserved pattern in the number of sites per genome independent of the location in Astyanax species. The location of the U1 snRNA gene was frequently associated with 5S rDNA sequences, indicating a possible interaction between the distinct repetitive DNA families. Finally, comparisons involving the location of U1 and U2 snRNA clusters in the chromosomes of Astyanax species revealed a very diverse pattern, suggesting that many rearrangements have occurred during the diversification process of this group.
Times Cited:
2
Related Records:
Hubbs, C.L. and Innes, W.T. (1936)Bridges, W. (1940)Gresser, E. B. and Breder, C. M. (1940)Breder, C. M. and Gresser, E. B. (1941)Breder, C. M. and Gresser, E. B. (1941)Breder, C. M. and Gresser, E. B. (1941)Breder, C. M. (1942)Osorio Tafall, B. F. (1943)Breder, C. M. (1943)Breder, C. M. (1943)Breder, C. M. (1944)Alvarez, J. (1946)Schlagel, S. R. and Breder, C. M. (1947)Breder, C. M. and Rasquin, P. (1947)Breder, C. M. and Rasquin, P. (1947)Alvarez, J. (1947)Rasquin, P. (1949)Luling, K. H. (1953)Luling, K. H. (1953)Luling, K. H. (1953)Stefanelli, A. (1954)Rasquin, P. and Rosenbloom, L. (1954)Stefanelli, A. (1954)Thines, G. (1954)Luling, K. H. (1954)Luling, K. H. (1954)Luling, K. H. (1955)Luling, K. H. (1955)Sadoglu, P. (1956)Thines, G. and Kahling, J. (1957)Sadoglu, P. (1957)Sadoglu, P. (1957)Cahn, P. H. (1958)Grobbel, G. and Hahn, G. (1958)Kahling, J. (1961)Luling, K. H. (1962)Burgers, A. C. J., Bennink, P. J. H. and van Oordt, G. J. (1963)Franck, A. (1964)Boucquey, C., Thines, G. and Van Der Borght, C. (1965)Thines, G., Wolff-Van Ermengem, F., Boucquey, C. and Soffie, M. (1965)Reed, M. (1966)Carmignani, M. P. A. (1966)Cavicchioli, G. and Guarnieri, P. (1966)Thines, G., Soffie, M. and Vandenbussche, E. (1966)Peters, N. and Peters, G. (1966)Pfeiffer, W. (1967)Pfeiffer, W. (1967)Popper, A. N. and Tavolga, W. N. (1967)Sadoglu, P. (1967)Schemmel, C. (1967)Walters, V. and Liu, R. K. (1967)Mattheij, J. A. (1968)Wilkens, H. (1968)Mattheij, J. A. (1968)Carmignani, M. P. A. (1968)Mattheij, J. A. (1969)Mattheij, J. A. and Sprangers, J. A. P. (1969)Sadoglu, P. and McKee, A. (1969)Weiss, B. A. (1969)Whitt, G. S. and Maeda, F. S. (1970)Popper, A. N. (1970)Wilkens, H. (1970)Wilkens, H. (1970)Wilkens, H. (1970)Mattheij, J. A. (1970)Mattheij, J. A. (1970)Gertychowa, R. (1970)Gertychowa, R. (1970)Weiss, B. and Martini, J. (1970)Wiley, S. and Mitchell, R. W. (1971)Popper, A. N. (1971)Wiley, S. and Mitchell, R. W. (1971)Wilkens, H. (1971)Zaccone, G. (1971)Gertychowa, R. (1971)Wilkens, H. (1972)Wilkens, H. (1972)Wilkens, H. (1972)Zaccone, G. (1972)Avise, J. C. and Selander, R. K. (1972)Wilkens, H. and Burns, R. J. (1972)Thines, G. and Wissocq, N. (1972)Yasuda, K. (1973)Zeitlin, S. M. (1973)Mitchell, R. W. (1973)Zeitlin, S. M. and McDevitt, D. S. (1973)Zeitlin, S. M. and McDevitt, D. S. (1973)Thines, G. and LeGrain, J. M. (1973)Voneida, T. J. (1973)Durand, J. P. (1973)Schemmel, C. (1973)Sligar, C. (1974)Chakraborty, R. and Nei, M. (1974)Schemmel, C. (1974)Schemmel, C. (1974)Omura, Y. (1975)Sadoglu, P. (1975)Peters, N., Scholl, A. and Wilkens, H. (1975)Erckens, W. and Weber, F. (1976)Sligar, C. and Voneida, T. J. (1976)Wilkens, H. (1976)Voneida, T. J. and Sligar, C. (1976)Herwig, H. J. (1976)Herwig, H. J. (1976)Durand, J. P. (1976)Yew, D. T. and Yoshihara, H. M. (1977)Kirby, R. F., Thompson, K. W. and Hubbs, C. (1977)Wilkens, H. (1977)Zaccone, G. (1977)Mitchell, R. W., Russell, W. H. and Elliott, W. R. (1977)Thines, G. and Weyers, M. (1978)Durand, J. P. (1978)Wilkens, H., Peters, H. and Schemmel, C. (1979)Woodhead, A. D. and Achey, P. M. (1979)Sadoglu, P. (1979)Durand, J. P. (1979)Quinn, T. P. (1980)Wilkens, H. (1980)Wilkens, H. (1980)Weissert, R. (1980)Schemmel, C. (1980)Weissert, R. and Campenhausen, C. (1981)Reddell, J. R. (1981)Campenhausen, C., Riess, I. and Weissert, R. (1981)Herwig, H. J. (1981)Erckens, W. and Martin, W. (1982)Erckens, W. and Martin, W. (1982)Jankowska, M. and Thines, G. (1982)Tabata, M. (1982)Lamprecht, G. and Weber, F. (1982)Rose, F. L. and Mitchell, R. W. (1982)Romero, A. (1983)Zilles, K., Tillmann, B. and Bennemann, R. (1983)Parzefall, J. (1983)Romero, A. (1984)Romero, A. (1984)Schuppa, M. (1984)Wilkens, H. (1984)Voneida, T. J. and Fish, S. E. (1984)Burchards, H., Dolle, A. and Parzefall, J. (1985)Teyke, T. (1985)Lamprecht, G. and Weber, F. (1985)Romero, A. (1985)Wilkens, H. (1985)Huppop, K. (1986)Romero, A. (1986)Wilkens, H. (1986)De Fraipont, M. (1986)Espinasa, L (1986)Fraipont, M. (1986)Parzefall, J. (1986)Wilkens, H. and Huppop, K. (1986)Hassan, E. S. (1986)De Fraipont, M. and Thines, G. (1986)De Fraipont, M. and Thines, G. (1986)Huppop, K. (1987)Wilkens, H. (1987)De Fraipont, M. (1987)De Fraipont, M. (1987)Huppop, K. (1988)Teyke, T. (1988)Fricke, D. (1988)Wilkens, H. (1988)De Fraipont, M. (1988)Huppop, K. (1989)Fack, H. and Wilkens, H. (1989)Teyke, T. (1989)Langecker, T. G. (1989)Fricke, D. and Parzefall, J. (1989)Hassan, E. S. (1989)Yokoyama, R. and Yokoyama, S. (1990)Yokoyama, R and Yokoyama, S (1990)Klimpel, B. and Parzefall, J. (1990)Teyke, T. (1990)Abdel-Latif, H., Hassan, E. S. and von Campenhausen, C. (1990)Langecker, T. G. (1990)Parzefall, J. and Fricke, D. (1990)Peters, N., Schmidt, W. and Fricke, D. (1990)Huppop, K. and Wilkens, H. (1991)Huppop, K. (1991)Riedel, G. and Krug, L. (1991)Campenhausen, C. (1991)Langecker, T. G., Wilkens, H. and Junge, P. (1991)Parzefall, J. and Fricke, D. (1991)Wilkens, H. and Meyer, M. (1992)Lamprecht, G. and Weber, F. (1992)Langecker, T. G. and Longley, G. (1992)Wilkens, H. (1992)Parzefall, J. (1992)De Fraipont, M. (1992)Parzefall, J. (1992)Hassan, E. S., Abdel-Latif, H. and Biebricher, R. (1992)Langecker, T. G. (1993)Langecker, T. G., Schmale, H. and Wilkens, H. (1993)Langecker, T. G., Schmale, H. and Wilkens, H. (1993)Parzefall, J. (1993)Hoffman, S. and Hausberg, C. (1993)Peters, N., Schacht, V., Schmidt, W. and Wilkens, H. (1993)Teyke, T. and Schaerer, S. (1994)Borowsky, R. (1994)Yokoyama, S., Meany, A., Wilkens, H. and Yokoyama, R. (1995)Langecker, T. G., Neumann, B., Hausberg, C. and Parzefall, J. (1995)Langecker, T. G., Wilkens, H. and Schmale, H. (1995)Borowsky, R. (1996)Riedel, G. (1997)Riedel, G. and Krug, L. (1997)Behrens, M., Langecker, T.G., Wilkens, H. and Schmale, H. (1997)Borowsky, R. and Espinasa, L. (1997)Contreras-Balderas, S. and Lozano-Vilano, M.D.L. (1998)Jeffery, WR and Martasian, DP (1998)Wilkens, H. (1998)Behrens, M, Wilkens, H and Schmale, H (1998)Kullander, S. O. (1999)Baker, CF and Montgomery, J (1999)Ford, D.C. (2000)Yamamoto, Y. and Jeffery, W. R. (2000)Jeffery, W. R., Strickler, A.G., Guiney, S., Heyser, D.G. and Tomarev, S.I. (2000)Espinasa, L. and Borowsky, R. (2000)Boudriot, F and Reutter, K (2001)Jeffery, W. R. (2001)Strickler, A.G., Yamamoto, Y. and Jeffery, W. R. (2001)Espinasa, L., Rivas-Manzano, P. and Perez, H.E. (2001)Espinasa, L. and Borowsky, R. (2001)Montgomery, J.C., Coombs, S. and Baker, C.F. (2001)Borowsky, RL and Wilkens, H (2002)Krejca, J. (2002)Romero, A., Jeffery, W.R. and Yamamoto, Y. (2002)Strickler, AG, Famuditimi, K and Jeffery, WR (2002)Berg, A. and Watson, G.M. (2002)Dowling, TE, Martasian, DP and Jeffery, WR (2002)Porter, M.L. and Crandall, K.A. (2003)Wilkens, H. and Strecker, U. (2003)Strecker, U. (2003)Strecker, U., Bernatchez, L. and Wilkens, H. (2003)Contreras-Balderas, S, Almada-Villela, P, Lozano-Vilano, M de L and Garcia-Ramirez, ME (2003)Sarma, SSS, Lopez-Romulo, A and Nandini, S (2003)McCauley, DW, Hixon, E and Jeffery, WR (2004)Protas ME, Hersey C, Kochanek D, Zhou Y, Wilkens H, Jeffery WR, Zon LI, Borowsky R, Tabin CJ. (2006)Protas, M., Conrad, M., Gross, J.B., Tabin, C. and Borowsky, R.L. (2007)Protas, M, Tabansky, I, Conrad, M, Gross, JB, Vidal, O, Tabin, C and Borowsky, RL (2008)Gross, J.B., Protas, M., Conrad, M., Scheid, P.E., Vidal, O., Jeffery, W.R., Tabin, C. and others (2008)Jeffery, WR (2009)Kowalko, J, Gross, JB, Protas, M, Borowsky, RL and Tabin, C (2009)Mirande, J.M. (2010)Yamamoto, Y. and Jeffery, W.R. (2011)Kish, P.E., Bohnsack, B.L., Gallina, D., Kasprick, D.S. and Kahana, A. (2011)Kowalko, J, Rohner, N, Borowsky, RL and Tabin, C (2011)Espinasa, L (2011)Esquivel-Bobadilla, S (2011)Esquivel-Bobadilla, S (2011)Bradic, M, Beerli, P and Borowsky, RL (2011)Idda, M.L., Bertolucci, C., Vallone, D., Gothilf, Y., Sánchez-Vázquez, F.J. and Foulkes N.S. (2012)Wilkens, H. (2012)Trontelj, P. (2012)Dufton, M, Hall, BK and Franz-Odendaal, T. (2012)Gross, J.B. (2012)Bradic, M., Beerli, P., Garcia-de Leon, F. J., Esquivel-Bobadilla, S. and Borowsky, R. L. (2012)Jeffery, W.R. (2012)Protas, M. and Jeffery, W. R. (2012)Stahl, AL (2013)Bibliowicz, J., Alie, A., Espinasa, L., Yoshizawa, M., Blin, M., Hinaux, H., Legendre, L., Pere, S. and Retaux, S. (2013)Atukorala, A. D. S., Hammer, C., Dufton, M. and Franz-Odendaal, T. A. (2013)Elliott, William R. (2013)Kowalko, J.E., Rohner, N., Rompani, S.B., Peterson, B.K., Linden, T.A., Yoshizawa, M., Kay, E.H., Weber, J., Hoekstra, H.E., Jeffery, W.R., Borowsky, R. and Tabin, C.J. 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